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Aliases : EMB2758
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Als_g07424 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g18401 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g12947 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g67468 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.14G004700.1 | Ceric.14G004700 | not classified & original description: pacid=50634585... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.21G088100.1 | Ceric.21G088100 | not classified & original description: pacid=50603070... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_29557 | VAC1, ECB2, ATECB2 | Pentatricopeptide repeat-containing protein At2g13600... | 0.03 | OrthoFinder output from all 47 species | |
| MA_10338179g0010 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g04955 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g07538 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g20615 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g44509 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g07329 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g11403 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g12531 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g13489 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g20392 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g57511 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g63028 | EMB2261 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g63629 | LPA66 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g63641 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g06505 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g07461 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g08791 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g10206 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g39244 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g49012 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g49230 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g55201 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo101239 | EMB2758 | Pentatricopeptide repeat-containing protein At4g33990... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g051780.3.1 | Solyc03g051780 | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g06160 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g09427 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g14323 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g16452 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g16587 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g18959 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g20031 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g20093 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g23113 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g25219 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g25906 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g26362 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g39327 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g40853 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g45696 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g49732 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g53601 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g04113 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e029119_P001 | Zm00001e029119 | Pentatricopeptide repeat-containing protein At2g33760... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
| MF | GO:0004674 | protein serine/threonine kinase activity | IEP | HCCA |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| MF | GO:0004813 | alanine-tRNA ligase activity | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
| BP | GO:0006419 | alanyl-tRNA aminoacylation | IEP | HCCA |
| BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 622 | 644 |
| IPR002885 | Pentatricopeptide_repeat | 217 | 239 |
| IPR002885 | Pentatricopeptide_repeat | 140 | 187 |
| IPR002885 | Pentatricopeptide_repeat | 547 | 595 |
| IPR002885 | Pentatricopeptide_repeat | 446 | 493 |
| IPR002885 | Pentatricopeptide_repeat | 344 | 391 |
| IPR002885 | Pentatricopeptide_repeat | 243 | 289 |
| No external refs found! |