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  5. Len_g03852

Len_g03852 (ATPTR2, PTR2, PTR2-B,...)


Aliases : ATPTR2, PTR2, PTR2-B, ATPTR2-B, NTR1

Description : anion transporter *(NRT1/PTR) & original description: none


Gene families : OG0000021 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g03852

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00147790 ATPTR2, PTR2,... Solute transport.carrier-mediated transport.MFS... 0.02 OrthoFinder output from all 47 species
Aop_g08452 PTR1, ATPTR1 anion transporter *(NRT1/PTR) & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g11244 No alias anion transporter *(NRT1/PTR) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g36563 ATPTR2, PTR2,... anion transporter *(NRT1/PTR) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.24G016400.1 Ceric.24G016400 anion transporter *(NRT1/PTR) & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g11335 No alias anion transporter *(NRT1/PTR) & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g10560 No alias anion transporter *(NRT1/PTR) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g24033 No alias anion transporter *(NRT1/PTR) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10263488g0010 ATPTR3, PTR3 anion transporter (NRT1/PTR) 0.03 OrthoFinder output from all 47 species
Ppi_g18091 NRT1.5 anion transporter *(NRT1/PTR) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g113430.3.1 Solyc03g113430 anion transporter (NRT1/PTR) 0.03 OrthoFinder output from all 47 species
Zm00001e015487_P001 NRT1.5, Zm00001e015487 anion transporter (NRT1/PTR) 0.01 OrthoFinder output from all 47 species
Zm00001e026398_P001 Zm00001e026398 anion transporter (NRT1/PTR) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008199 ferric iron binding IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
InterPro domains Description Start Stop
IPR000109 POT_fam 127 555
No external refs found!