Len_g03631 (ATRAC11, ARAC11,...)

Aliases : ATRAC11, ARAC11, ROP1, ROP1AT, ATROP1

Description : small GTPase *(ROP) & original description: none

Gene families : OG0000503 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000503_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Len_g03631

Target	Alias	Description	ECC score	Gene Family Method
Adi_g051525	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g051539	ARAC3, RAC3,...	small GTPase *(ROP) & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g108460	ATROP4, ROP4,...	small GTPase *(ROP) & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g14680	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g08767	ATRAC4, ARAC4,...	small GTPase *(ROP) & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g07842	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g35244	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.1Z234700.1	ATRAC11, ARAC11,...	not classified & original description: pacid=50637251...	0.04	OrthoFinder output from all 47 species
LOC_Os05g43820.1	ARAC7, ROP9,...	small GTPase (ROP)	0.02	OrthoFinder output from all 47 species
Len_g54469	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e016302_P001	ATRAC1, ROP3,...	small GTPase (ROP)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEP	HCCA
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0004175	endopeptidase activity	IEP	HCCA
MF	GO:0004252	serine-type endopeptidase activity	IEP	HCCA
BP	GO:0006325	chromatin organization	IEP	HCCA
BP	GO:0006334	nucleosome assembly	IEP	HCCA
BP	GO:0006338	chromatin remodeling	IEP	HCCA
BP	GO:0006364	rRNA processing	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0006465	signal peptide processing	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
BP	GO:0008150	biological_process	IEP	HCCA
MF	GO:0008236	serine-type peptidase activity	IEP	HCCA
BP	GO:0016043	cellular component organization	IEP	HCCA
BP	GO:0016072	rRNA metabolic process	IEP	HCCA
BP	GO:0016485	protein processing	IEP	HCCA
MF	GO:0017171	serine hydrolase activity	IEP	HCCA
BP	GO:0022607	cellular component assembly	IEP	HCCA
CC	GO:0030684	preribosome	IEP	HCCA
CC	GO:0032040	small-subunit processome	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
CC	GO:0032993	protein-DNA complex	IEP	HCCA
BP	GO:0034470	ncRNA processing	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA
BP	GO:0034728	nucleosome organization	IEP	HCCA
BP	GO:0042255	ribosome assembly	IEP	HCCA
BP	GO:0042256	cytosolic ribosome assembly	IEP	HCCA
MF	GO:0043021	ribonucleoprotein complex binding	IEP	HCCA
MF	GO:0043022	ribosome binding	IEP	HCCA
BP	GO:0043933	protein-containing complex organization	IEP	HCCA
CC	GO:0044815	DNA packaging complex	IEP	HCCA
MF	GO:0044877	protein-containing complex binding	IEP	HCCA
BP	GO:0051604	protein maturation	IEP	HCCA
BP	GO:0065003	protein-containing complex assembly	IEP	HCCA
BP	GO:0065004	protein-DNA complex assembly	IEP	HCCA
BP	GO:0070925	organelle assembly	IEP	HCCA
BP	GO:0071824	protein-DNA complex subunit organization	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA
BP	GO:0140694	non-membrane-bounded organelle assembly	IEP	HCCA
CC	GO:1990904	ribonucleoprotein complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001806	Small_GTPase	8	178

External Links

No external refs found!

Len_g03631 (ATRAC11, ARAC11,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation