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  5. Len_g03220

Len_g03220


Description : not classified & original description: none


Gene families : OG0001594 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001594_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g03220
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
Adi_g106339 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g01276 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g23523 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g25621 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g33006 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G062800.1 Ceric.01G062800 not classified & original description: pacid=50590487... 0.03 OrthoFinder output from all 47 species
Dde_g21268 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp7g03590.1 No alias Uncharacterized oxidoreductase At1g06690, chloroplastic... 0.03 OrthoFinder output from all 47 species
Mp7g09440.1 No alias Uncharacterized oxidoreductase At1g06690, chloroplastic... 0.03 OrthoFinder output from all 47 species
Nbi_g09196 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g09208 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g17673 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g44915 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g46435 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0047.g013456 No alias not classified & original description: CDS=35-1261 0.03 OrthoFinder output from all 47 species
Sam_g06889 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g09531 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc11g067160.2.1 Solyc11g067160 Flagellar radial spoke protein 5 OS=Chlamydomonas... 0.03 OrthoFinder output from all 47 species
Spa_g09965 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g11098 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06714 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR023210 NADP_OxRdtase_dom 76 378
No external refs found!