Len_g02383


Description : not classified & original description: none


Gene families : OG0004930 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004930_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g02383
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
Ala_g02200 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g01055 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g07311 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene39761.t1 Aspi01Gene39761 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0262.g060841 No alias not classified & original description: CDS=82-2085 0.03 OrthoFinder output from all 47 species
LOC_Os03g11670.1 SVR7, LOC_Os03g11670 Pentatricopeptide repeat-containing protein ATP4... 0.02 OrthoFinder output from all 47 species
MA_283144g0010 No alias Pentatricopeptide repeat-containing protein At5g46580,... 0.03 OrthoFinder output from all 47 species
Pir_g15542 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g06411 SVR7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g11215 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g04939 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08352 EMB2750 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000850_P001 SVR7, Zm00001e000850 Pentatricopeptide repeat-containing protein ATP4,... 0.02 OrthoFinder output from all 47 species
Zm00001e006409_P001 Zm00001e006409 Pentatricopeptide repeat-containing protein At5g46580,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004332 fructose-bisphosphate aldolase activity IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 296 343
IPR002885 Pentatricopeptide_repeat 198 240
IPR002885 Pentatricopeptide_repeat 369 397
IPR002885 Pentatricopeptide_repeat 441 468
IPR002885 Pentatricopeptide_repeat 406 434
No external refs found!