1. Home
  2. Species
  3. Lindsaea ensifolia
  4. Sequence
  5. Len_g01828

Len_g01828


Description : proline-tRNA ligase & original description: none


Gene families : OG0001971 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001971_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g01828

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00127050 evm_27.TU.AmTr_v1... Protein biosynthesis.aminoacyl-tRNA synthetase... 0.02 OrthoFinder output from all 47 species
AT5G10880 No alias tRNA synthetase-related / tRNA ligase-related 0.02 OrthoFinder output from all 47 species
Cba_g56664 No alias proline-tRNA ligase & original description: none 0.03 OrthoFinder output from all 47 species
Cre09.g406200 OVA6, PRORS1 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.02 OrthoFinder output from all 47 species
Cre10.g429100 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.02 OrthoFinder output from all 47 species
Dde_g00716 No alias proline-tRNA ligase & original description: none 0.04 OrthoFinder output from all 47 species
Mp2g25470.1 No alias proline-tRNA ligase 0.02 OrthoFinder output from all 47 species
Nbi_g12513 No alias proline-tRNA ligase & original description: none 0.04 OrthoFinder output from all 47 species
Smo74713 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.03 OrthoFinder output from all 47 species
Tin_g15505 No alias proline-tRNA ligase & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e007170_P001 Zm00001e007170 proline-tRNA ligase 0.02 OrthoFinder output from all 47 species
Zm00001e024670_P003 Zm00001e024670 proline-tRNA ligase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0004812 aminoacyl-tRNA ligase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006418 tRNA aminoacylation for protein translation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
CC GO:0016272 prefoldin complex IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP HCCA
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR016061 Pro-tRNA_ligase_II_C 469 542
IPR002314 aa-tRNA-synt_IIb 161 327
IPR004154 Anticodon-bd 346 438
No external refs found!