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  5. Len_g01653

Len_g01653


Description : regulatory protein *(SCAMP) of exocytic trafficking & original description: none


Gene families : OG0001155 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001155_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g01653

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00135190 evm_27.TU.AmTr_v1... Secretory carrier-associated membrane protein 4... 0.05 OrthoFinder output from all 47 species
AT1G03550 No alias Secretory carrier membrane protein (SCAMP) family protein 0.02 OrthoFinder output from all 47 species
AT1G11180 No alias Secretory carrier membrane protein (SCAMP) family protein 0.03 OrthoFinder output from all 47 species
Azfi_s2043.g108825 No alias regulatory protein *(SCAMP) of exocytic trafficking &... 0.05 OrthoFinder output from all 47 species
GSVIVT01012985001 No alias Secretory carrier-associated membrane protein 4... 0.02 OrthoFinder output from all 47 species
Solyc12g010750.2.1 Solyc12g010750 Secretory carrier-associated membrane protein 1 OS=Oryza... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0015031 protein transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005096 GTPase activator activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
BP GO:0006488 dolichol-linked oligosaccharide biosynthetic process IEP HCCA
BP GO:0006490 oligosaccharide-lipid intermediate biosynthetic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR007273 SCAMP 111 283
No external refs found!