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  5. Nbi_g42973

Nbi_g42973 (ELF3, PYK20)


Aliases : ELF3, PYK20

Description : component *(ELF3) of circadian clock Evening complex (EC) & original description: none


Gene families : OG0001659 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001659_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g42973
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
Ala_g33461 ELF3, PYK20 component *(ELF3) of circadian clock Evening complex... 0.03 OrthoFinder output from all 47 species
Als_g21424 ELF3, PYK20 component *(ELF3) of circadian clock Evening complex... 0.03 OrthoFinder output from all 47 species
Aob_g04352 ELF3, PYK20 component *(ELF3) of circadian clock Evening complex... 0.03 OrthoFinder output from all 47 species
Cba_g12036 ELF3, PYK20 component *(ELF3) of circadian clock Evening complex... 0.03 OrthoFinder output from all 47 species
Ceric.08G069300.1 ELF3, PYK20,... component *(ELF3) of circadian clock Evening complex... 0.03 OrthoFinder output from all 47 species
LOC_Os06g05060.1 ELF3, PYK20,... transcription factor (ELF3). component ELF3 of circadian... 0.04 OrthoFinder output from all 47 species
Mp1g10870.1 ELF3, PYK20 transcription factor (ELF3). component ELF3 of circadian... 0.02 OrthoFinder output from all 47 species
Smo415241 ELF3, PYK20 Multi-process regulation.circadian clock.evening element... 0.02 OrthoFinder output from all 47 species
Solyc06g062480.4.1 Solyc06g062480 transcription factor (ELF3). component ELF3 of circadian... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009143 nucleoside triphosphate catabolic process IEP HCCA
BP GO:0009306 protein secretion IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0035592 establishment of protein localization to extracellular region IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0046903 secretion IEP HCCA
MF GO:0047429 nucleoside triphosphate diphosphatase activity IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071692 protein localization to extracellular region IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:0140352 export from cell IEP HCCA
BP GO:1901292 nucleoside phosphate catabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!