AT5G24740


Description : Protein of unknown function (DUF1162)


Gene families : OG_01_0000991 (Gene family) Phylogenetic Tree(s): OG0000991_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT5G24740
Cluster HCCA cluster: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
Cre17.g727600 No alias No description available 0.02 Gene family
GSVIVT01019366001 No alias 35.2 not assigned.unknown 0.02 Gene family
LOC_Os08g02354 Os08g0116700 35.2 not assigned.unknown 0.03 Gene family
Solyc11g045160.2.1 Solyc11g045160.2 35.2 not assigned.unknown 0.03 Gene family
Solyc11g045185.1.1 Solyc11g045185.1 35.2 not assigned.unknown 0.03 Gene family

Type GO Term Name Evidence Source
BP GO:0000278 mitotic cell cycle RCA Arabidopsis.org
CC GO:0005794 Golgi apparatus ISM Arabidopsis.org
BP GO:0006396 RNA processing RCA Arabidopsis.org
BP GO:0009887 animal organ morphogenesis RCA Arabidopsis.org
BP GO:0009888 tissue development RCA Arabidopsis.org
BP GO:0010015 root morphogenesis IMP Arabidopsis.org
BP GO:0010082 regulation of root meristem growth IMP Arabidopsis.org
BP GO:0010413 glucuronoxylan metabolic process RCA Arabidopsis.org
BP GO:0010638 positive regulation of organelle organization RCA Arabidopsis.org
BP GO:0033044 regulation of chromosome organization RCA Arabidopsis.org
BP GO:0045492 xylan biosynthetic process RCA Arabidopsis.org
BP GO:1990064 ground tissue pattern formation IMP Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR031646 VPS13_N2 138 346
IPR026854 VPS13_N 11 118
IPR031642 VPS13_mid_rpt 564 784
IPR009543 SHR-BD 2451 2701
IPR031645 VPS13_C 3018 3185
No external refs found!