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  5. Nbi_g26346

Nbi_g26346


Description : not classified & original description: none


Gene families : OG0005584 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005584_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g26346
Cluster HCCA: Cluster_165

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00085200 evm_27.TU.AmTr_v1... Probable plastid-lipid-associated protein 12,... 0.04 OrthoFinder output from all 47 species
AT1G51110 No alias Plastid-lipid associated protein PAP / fibrillin family protein 0.11 OrthoFinder output from all 47 species
Adi_g006512 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g01024 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g11820 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aob_g02994 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene25035.t1 Aspi01Gene25035 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene25037.t1 Aspi01Gene25037 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0315.g064307 No alias not classified & original description: CDS=129-1313 0.03 OrthoFinder output from all 47 species
Cba_g29671 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ceric.18G084800.1 Ceric.18G084800 not classified & original description: pacid=50622462... 0.06 OrthoFinder output from all 47 species
Cre03.g176350 No alias Probable plastid-lipid-associated protein 12,... 0.04 OrthoFinder output from all 47 species
Dac_g13863 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g04559 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Ehy_g19599 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01025367001 No alias Probable plastid-lipid-associated protein 12,... 0.08 OrthoFinder output from all 47 species
Gb_09730 No alias Probable plastid-lipid-associated protein 12,... 0.05 OrthoFinder output from all 47 species
LOC_Os07g28790.1 LOC_Os07g28790 Probable plastid-lipid-associated protein 12,... 0.12 OrthoFinder output from all 47 species
Len_g13850 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g09919 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
MA_10054g0010 No alias Probable plastid-lipid-associated protein 12,... 0.02 OrthoFinder output from all 47 species
MA_5934993g0010 No alias Probable plastid-lipid-associated protein 12,... 0.02 OrthoFinder output from all 47 species
Mp1g23400.1 No alias Probable plastid-lipid-associated protein 12,... 0.1 OrthoFinder output from all 47 species
Msp_g48231 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g45226 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Pir_g04696 No alias not classified & original description: none 0.14 OrthoFinder output from all 47 species
Pnu_g26094 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31225 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Sam_g10823 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Solyc01g006330.4.1 Solyc01g006330 Probable plastid-lipid-associated protein 12,... 0.1 OrthoFinder output from all 47 species
Spa_g09151 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g09335 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e034859_P002 Zm00001e034859 Probable plastid-lipid-associated protein 12,... 0.14 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003725 double-stranded RNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0098809 nitrite reductase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR006843 PAP/fibrillin_dom 293 431
IPR006843 PAP/fibrillin_dom 100 278
No external refs found!