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  5. Nbi_g20336

Nbi_g20336 (CAC2)


Aliases : CAC2

Description : EC_6.4 ligase forming carbon-carbon bond & original description: none


Gene families : OG0000769 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0000769_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g20336

Target Alias Description ECC score Gene Family Method Actions
Adi_g025550 CAC2 EC_6.4 ligase forming carbon-carbon bond & original... 0.02 OrthoFinder output from all 39 species
Ala_g10840 CAC2 EC_6.4 ligase forming carbon-carbon bond & original... 0.01 OrthoFinder output from all 39 species
Als_g48155 CAC2 EC_6.4 ligase forming carbon-carbon bond & original... 0.01 OrthoFinder output from all 39 species
Aspi01Gene12629.t1 CAC2, Aspi01Gene12629 EC_6.4 ligase forming carbon-carbon bond & original... 0.01 OrthoFinder output from all 39 species
Azfi_s0112.g045785 CAC2 EC_6.4 ligase forming carbon-carbon bond & original... 0.01 OrthoFinder output from all 39 species
Cba_g38696 CAC2 EC_6.4 ligase forming carbon-carbon bond & original... 0.01 OrthoFinder output from all 39 species
Ceric.06G084300.1 CAC2, Ceric.06G084300 EC_6.4 ligase forming carbon-carbon bond & original... 0.01 OrthoFinder output from all 39 species
Ceric.34G002700.1 CAC2, Ceric.34G002700 EC_6.4 ligase forming carbon-carbon bond & original... 0.03 OrthoFinder output from all 39 species
Mp6g09060.1 CAC2 biotin carboxylase subunit of polymeric acetyl-CoA... 0.01 OrthoFinder output from all 39 species
Ore_g16888 CAC2 EC_6.4 ligase forming carbon-carbon bond & original... 0.01 OrthoFinder output from all 39 species
Spa_g02210 CAC2 EC_6.4 ligase forming carbon-carbon bond & original... 0.03 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004329 formate-tetrahydrofolate ligase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004814 arginine-tRNA ligase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006420 arginyl-tRNA aminoacylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009092 homoserine metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
BP GO:0019346 transsulfuration IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0050667 homocysteine metabolic process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR005479 CbamoylP_synth_lsu-like_ATP-bd 248 455
IPR005482 Biotin_COase_C 469 574
IPR005481 BC-like_N 136 243
No external refs found!