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  5. Nbi_g18164

Nbi_g18164


Description : gamma-aminobutyric acid transporter *(GAT) & original description: none


Gene families : OG0000375 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000375_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g18164
Cluster HCCA: Cluster_128

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene71605.t1 Aspi01Gene71605 gamma-aminobutyric acid transporter *(GAT) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene71620.t1 Aspi01Gene71620 gamma-aminobutyric acid transporter *(GAT) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g01261 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.02 OrthoFinder output from all 47 species
Nbi_g23086 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16685 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g40704 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g59285 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008175 tRNA methyltransferase activity IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR013057 AA_transpt_TM 66 471
No external refs found!