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  5. Nbi_g17470

Nbi_g17470


Description : zinc metalloprotease *(PGM48) & original description: none


Gene families : OG0007941 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007941_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g17470
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AT3G27110 No alias Peptidase family M48 family protein 0.03 OrthoFinder output from all 47 species
Adi_g115621 No alias zinc metalloprotease *(PGM48) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g10686 No alias zinc metalloprotease *(PGM48) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g01491 No alias zinc metalloprotease *(PGM48) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g00655 No alias zinc metalloprotease *(PGM48) & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g26908 No alias zinc metalloprotease *(PGM48) & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.19G043600.1 Ceric.19G043600 zinc metalloprotease *(PGM48) & original description:... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020563.171 No alias Protein degradation.peptidase families.metallopeptidase... 0.01 OrthoFinder output from all 47 species
Dde_g07047 No alias zinc metalloprotease *(PGM48) & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g18628 No alias zinc metalloprotease *(PGM48) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01033097001 No alias Protein degradation.peptidase families.metallopeptidase... 0.04 OrthoFinder output from all 47 species
LOC_Os01g73910.1 LOC_Os01g73910 zinc metalloprotease (PGM48) 0.04 OrthoFinder output from all 47 species
Msp_g01045 No alias zinc metalloprotease *(PGM48) & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g04383 No alias zinc metalloprotease *(PGM48) & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g09361 No alias zinc metalloprotease *(PGM48) & original description: none 0.08 OrthoFinder output from all 47 species
Ppi_g40603 No alias zinc metalloprotease *(PGM48) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g24488 No alias zinc metalloprotease *(PGM48) & original description: none 0.05 OrthoFinder output from all 47 species
Solyc03g005000.4.1 Solyc03g005000 zinc metalloprotease (PGM48) 0.06 OrthoFinder output from all 47 species
Spa_g06447 No alias zinc metalloprotease *(PGM48) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e017196_P001 Zm00001e017196 zinc metalloprotease (PGM48) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEA Interproscan
BP GO:0006508 proteolysis IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005985 sucrose metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
MF GO:0016157 sucrose synthase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR001915 Peptidase_M48 137 331
No external refs found!