Nbi_g10094 (PDS3, PDS, PDE226)


Aliases : PDS3, PDS, PDE226

Description : not classified & original description: none


Gene families : OG0002839 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002839_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g10094

Target Alias Description ECC score Gene Family Method Actions
Aev_g19734 PDS3, PDS, PDE226 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g07518 PDS3, PDS, PDE226 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g03808 PDS3, PDS, PDE226 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g26743 PDS3, PDS, PDE226 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.18G017400.1 PDS3, PDS,... not classified & original description: pacid=50621794... 0.05 OrthoFinder output from all 47 species
Ceric.25G032300.1 Ceric.25G032300 not classified & original description: pacid=50594452... 0.03 OrthoFinder output from all 47 species
Dac_g13672 PDS3, PDS, PDE226 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g01530 PDS3, PDS, PDE226 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g05913 PDS3, PDS, PDE226 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01023990001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os04g47290.2 LOC_Os04g47290 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g13429 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06016 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g34904 PDS3, PDS, PDE226 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_580945g0010 LDL3 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp1g18160.1 PDS3, PDS, PDE226 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g03292 PDS3, PDS, PDE226 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g56449 PDS3, PDS, PDE226 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ppi_g05186 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Smo74261 PDS3, PDS, PDE226 15-cis-phytoene desaturase, chloroplastic/chromoplastic... 0.03 OrthoFinder output from all 47 species
Spa_g29749 PDS3, PDS, PDE226 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Tin_g13831 PDS3, PDS, PDE226 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Zm00001e007260_P002 Zm00001e007260 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004332 fructose-bisphosphate aldolase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002937 Amino_oxidase 63 503
No external refs found!