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Aliases : emb1417
Description : not classified & original description: none
Gene families : OG0001686 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001686_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Nbi_g09758 | |
| Cluster | HCCA: Cluster_170 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Aop_g21409 | emb1417 | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Azfi_s0061.g035053 | emb1417 | not classified & original description: CDS=134-1234 | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g33827 | emb1417 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g55290.2 | emb1417, LOC_Os01g55290 | Pentatricopeptide repeat-containing protein At4g21190... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os07g36180.2 | LOC_Os07g36180 | Pentatricopeptide repeat-containing protein At4g18975,... | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g05415 | emb1417 | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Lfl_g32188 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g06884 | emb1417 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g27530 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g07146 | emb1417 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0290.g027162 | emb1417 | not classified & original description: CDS=48-1184 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g09326 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g071570.4.1 | Solyc02g071570 | Pentatricopeptide repeat-containing protein At4g18975,... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g007600.3.1 | emb1417, Solyc03g007600 | Pentatricopeptide repeat-containing protein At4g21190... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g12796 | emb1417 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e019767_P001 | emb1417, Zm00001e019767 | Pentatricopeptide repeat-containing protein At4g21190... | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000287 | magnesium ion binding | IEP | HCCA |
| MF | GO:0003747 | translation release factor activity | IEP | HCCA |
| MF | GO:0004222 | metalloendopeptidase activity | IEP | HCCA |
| MF | GO:0004518 | nuclease activity | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006166 | purine ribonucleoside salvage | IEP | HCCA |
| BP | GO:0006190 | inosine salvage | IEP | HCCA |
| BP | GO:0006415 | translational termination | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | HCCA |
| MF | GO:0008079 | translation termination factor activity | IEP | HCCA |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
| MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
| MF | GO:0008252 | nucleotidase activity | IEP | HCCA |
| MF | GO:0008253 | 5'-nucleotidase activity | IEP | HCCA |
| BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
| BP | GO:0009116 | nucleoside metabolic process | IEP | HCCA |
| BP | GO:0009117 | nucleotide metabolic process | IEP | HCCA |
| BP | GO:0009119 | ribonucleoside metabolic process | IEP | HCCA |
| BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | HCCA |
| BP | GO:0009163 | nucleoside biosynthetic process | IEP | HCCA |
| BP | GO:0009259 | ribonucleotide metabolic process | IEP | HCCA |
| MF | GO:0010181 | FMN binding | IEP | HCCA |
| BP | GO:0015969 | guanosine tetraphosphate metabolic process | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | HCCA |
| MF | GO:0016791 | phosphatase activity | IEP | HCCA |
| BP | GO:0019637 | organophosphate metabolic process | IEP | HCCA |
| BP | GO:0019693 | ribose phosphate metabolic process | IEP | HCCA |
| BP | GO:0022411 | cellular component disassembly | IEP | HCCA |
| BP | GO:0030163 | protein catabolic process | IEP | HCCA |
| MF | GO:0030246 | carbohydrate binding | IEP | HCCA |
| MF | GO:0030247 | polysaccharide binding | IEP | HCCA |
| BP | GO:0032984 | protein-containing complex disassembly | IEP | HCCA |
| BP | GO:0033865 | nucleoside bisphosphate metabolic process | IEP | HCCA |
| BP | GO:0033875 | ribonucleoside bisphosphate metabolic process | IEP | HCCA |
| BP | GO:0034032 | purine nucleoside bisphosphate metabolic process | IEP | HCCA |
| BP | GO:0034035 | purine ribonucleoside bisphosphate metabolic process | IEP | HCCA |
| BP | GO:0034404 | nucleobase-containing small molecule biosynthetic process | IEP | HCCA |
| BP | GO:0042278 | purine nucleoside metabolic process | IEP | HCCA |
| BP | GO:0042451 | purine nucleoside biosynthetic process | IEP | HCCA |
| BP | GO:0042455 | ribonucleoside biosynthetic process | IEP | HCCA |
| MF | GO:0042578 | phosphoric ester hydrolase activity | IEP | HCCA |
| BP | GO:0043094 | cellular metabolic compound salvage | IEP | HCCA |
| BP | GO:0043101 | purine-containing compound salvage | IEP | HCCA |
| BP | GO:0043174 | nucleoside salvage | IEP | HCCA |
| BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
| BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
| MF | GO:0045182 | translation regulator activity | IEP | HCCA |
| BP | GO:0046102 | inosine metabolic process | IEP | HCCA |
| BP | GO:0046103 | inosine biosynthetic process | IEP | HCCA |
| BP | GO:0046128 | purine ribonucleoside metabolic process | IEP | HCCA |
| BP | GO:0046129 | purine ribonucleoside biosynthetic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| MF | GO:0050483 | IMP 5'-nucleotidase activity | IEP | HCCA |
| BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | HCCA |
| BP | GO:0072521 | purine-containing compound metabolic process | IEP | HCCA |
| BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | HCCA |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
| BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | HCCA |
| BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901565 | organonitrogen compound catabolic process | IEP | HCCA |
| BP | GO:1901657 | glycosyl compound metabolic process | IEP | HCCA |
| BP | GO:1901659 | glycosyl compound biosynthetic process | IEP | HCCA |
| MF | GO:2001070 | starch binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |