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  5. Nbi_g09208

Nbi_g09208


Description : not classified & original description: none


Gene families : OG0001594 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001594_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g09208
Cluster HCCA: Cluster_165

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00174940 evm_27.TU.AmTr_v1... Flagellar radial spoke protein 5 OS=Chlamydomonas reinhardtii 0.08 OrthoFinder output from all 47 species
AT2G27680 No alias NAD(P)-linked oxidoreductase superfamily protein 0.06 OrthoFinder output from all 47 species
Adi_g106339 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aev_g10500 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g34733 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g12608 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Ala_g23161 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Als_g20867 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aob_g04889 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04180 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g06517 No alias not classified & original description: none 0.14 OrthoFinder output from all 47 species
Aop_g25621 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0007.g010969 No alias not classified & original description: CDS=1-1290 0.03 OrthoFinder output from all 47 species
Cba_g11219 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.31G057400.1 Ceric.31G057400 not classified & original description: pacid=50573802... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000215.56 No alias Pyridoxal reductase, chloroplastic OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000507.23 No alias Flagellar radial spoke protein 5 OS=Chlamydomonas reinhardtii 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020941.49 No alias Flagellar radial spoke protein 5 OS=Chlamydomonas reinhardtii 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021257.23 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre12.g518900 No alias Pyridoxal reductase, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dac_g07449 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g17624 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g17907 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g00919 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g43114 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g09570 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23280 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05551 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_39238 No alias Flagellar radial spoke protein 5 OS=Chlamydomonas... 0.04 OrthoFinder output from all 47 species
LOC_Os09g39390.1 LOC_Os09g39390 Flagellar radial spoke protein 5 OS=Chlamydomonas... 0.05 OrthoFinder output from all 47 species
Len_g02237 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g03220 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g03039 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
MA_10432791g0010 No alias Flagellar radial spoke protein 5 OS=Chlamydomonas... 0.02 OrthoFinder output from all 47 species
MA_31479g0010 No alias Pyridoxal reductase, chloroplastic OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp7g03590.1 No alias Uncharacterized oxidoreductase At1g06690, chloroplastic... 0.02 OrthoFinder output from all 47 species
Mp7g09440.1 No alias Uncharacterized oxidoreductase At1g06690, chloroplastic... 0.06 OrthoFinder output from all 47 species
Msp_g05914 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g08736 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g20010 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g19527 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g58344 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Ppi_g17673 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ppi_g44915 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0047.g013456 No alias not classified & original description: CDS=35-1261 0.03 OrthoFinder output from all 47 species
Sam_g09531 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g09532 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g26730 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo92083 No alias Uncharacterized oxidoreductase At1g06690, chloroplastic... 0.02 OrthoFinder output from all 47 species
Spa_g09965 No alias not classified & original description: none 0.13 OrthoFinder output from all 47 species
Spa_g11098 No alias not classified & original description: none 0.15 OrthoFinder output from all 47 species
Tin_g06714 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Zm00001e009481_P003 Zm00001e009481 Uncharacterized oxidoreductase At1g06690, chloroplastic... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR023210 NADP_OxRdtase_dom 95 396
No external refs found!