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  5. Nbi_g06674

Nbi_g06674 (emb1075)


Aliases : emb1075

Description : serine decarboxylase & original description: none


Gene families : OG0002528 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002528_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g06674

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00012550 emb1075,... Lipid metabolism.glycerolipid... 0.02 OrthoFinder output from all 47 species
Ala_g31163 emb1075 serine decarboxylase & original description: none 0.08 OrthoFinder output from all 47 species
Als_g22217 emb1075 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g17891 emb1075 serine decarboxylase & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene01953.t1 emb1075, Aspi01Gene01953 serine decarboxylase & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0201.g057604 emb1075 not classified & original description: CDS=1-1401 0.03 OrthoFinder output from all 47 species
Ceric.05G033900.1 emb1075, Ceric.05G033900 serine decarboxylase & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.24G027200.1 emb1075, Ceric.24G027200 serine decarboxylase & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g20506 emb1075 serine decarboxylase & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01034903001 emb1075 Lipid metabolism.glycerolipid... 0.02 OrthoFinder output from all 47 species
LOC_Os10g01640.1 emb1075, LOC_Os10g01640 Serine decarboxylase 2 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
Lfl_g01589 emb1075 serine decarboxylase & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g24153 emb1075 serine decarboxylase & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g32276 emb1075 serine decarboxylase & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g09590 emb1075 serine decarboxylase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc08g006750.4.1 emb1075, Solyc08g006750 Histidine decarboxylase OS=Solanum lycopersicum... 0.02 OrthoFinder output from all 47 species
Solyc08g066240.3.1 emb1075, Solyc08g066240 Histidine decarboxylase OS=Solanum lycopersicum... 0.02 OrthoFinder output from all 47 species
Solyc08g066250.4.1 emb1075, Solyc08g066250 Histidine decarboxylase OS=Solanum lycopersicum... 0.04 OrthoFinder output from all 47 species
Solyc08g068665.1.1 emb1075, Solyc08g068665 Histidine decarboxylase OS=Solanum lycopersicum... 0.02 OrthoFinder output from all 47 species
Spa_g56020 emb1075 serine decarboxylase & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016830 carbon-carbon lyase activity IEA Interproscan
BP GO:0019752 carboxylic acid metabolic process IEA Interproscan
MF GO:0030170 pyridoxal phosphate binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0045048 protein insertion into ER membrane IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051205 protein insertion into membrane IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR002129 PyrdxlP-dep_de-COase 174 390
No external refs found!