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  5. Nbi_g05908

Nbi_g05908


Description : not classified & original description: none


Gene families : OG0008626 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008626_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g05908

Target Alias Description ECC score Gene Family Method Actions
Adi_g058535 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g12369 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g04877 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Azfi_s0028.g023868 No alias not classified & original description: CDS=112-915 0.02 OrthoFinder output from all 47 species
Ceric.34G040000.1 Ceric.34G040000 not classified & original description: pacid=50623148... 0.04 OrthoFinder output from all 47 species
Dcu_g09585 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g11903 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02856 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01019806001 No alias No description available 0.07 OrthoFinder output from all 47 species
LOC_Os02g02390.1 LOC_Os02g02390 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Lfl_g04234 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Mp2g11640.1 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Msp_g47512 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g65046 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0068.g016351 No alias delta-12/delta-15 fatty acid desaturase & original... 0.03 OrthoFinder output from all 47 species
Sam_g17254 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Solyc08g007950.3.1 Solyc08g007950 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e013455_P001 Zm00001e013455 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0032977 membrane insertase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140597 protein carrier chaperone IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003029 S1_domain 1038 1109
No external refs found!