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  5. Nbi_g05429

Nbi_g05429


Description : protease *(RBL) & original description: none


Gene families : OG0007468 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007468_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g05429
Cluster HCCA: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
AT5G38510 No alias Rhomboid-related intramembrane serine protease family protein 0.02 OrthoFinder output from all 47 species
Adi_g058864 No alias protease *(RBL) & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g24032 No alias protease *(RBL) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.36G063500.1 Ceric.36G063500 protease *(RBL) & original description: pacid=50568520... 0.03 OrthoFinder output from all 47 species
Dde_g23842 No alias protease *(RBL) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18875 No alias protease *(RBL) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os02g22100.1 LOC_Os02g22100 protease (RBL) 0.04 OrthoFinder output from all 47 species
Mp1g24540.1 No alias protease (RBL) 0.03 OrthoFinder output from all 47 species
Pnu_g07307 No alias protease *(RBL) & original description: none 0.04 OrthoFinder output from all 47 species
Smo438082 No alias Protein degradation.peptidase families.serine-type... 0.03 OrthoFinder output from all 47 species
Smo438240 No alias Protein degradation.peptidase families.serine-type... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
BP GO:0010257 NADH dehydrogenase complex assembly IEP HCCA
BP GO:0010258 NADH dehydrogenase complex (plastoquinone) assembly IEP HCCA
BP GO:0010275 NAD(P)H dehydrogenase complex assembly IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR022764 Peptidase_S54_rhomboid_dom 284 422
No external refs found!