GSVIVT01031526001


Description : 1.3.13 PS.calvin cycle.rubisco interacting Encodes chaperonin-60 alpha, a molecular chaperone involved in Rubisco folding. Mutants display aberrant chloroplast and embryo development. chaperonin-60alpha (CPN60A)


Gene families : OG_01_0000305 (Gene family) Phylogenetic Tree(s): OG0000305_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): GSVIVT01031526001
Cluster HCCA cluster: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
AT2G28000 CH-CPN60A, CPN60A, SLP chaperonin-60alpha 0.21 Gene family
AT3G13470 No alias TCP-1/cpn60 chaperonin family protein 0.04 Gene family
AT5G18820 EMB3007 TCP-1/cpn60 chaperonin family protein 0.02 Gene family
Cpa|evm.model.tig00001269.7 No alias 29.6 protein.folding mitochondrial chaperonin HSP.... 0.01 Gene family
Cre04.g231222 No alias 1.3.13 PS.calvin cycle.rubisco interacting Encodes... 0.06 Gene family
Cre06.g309100 No alias 29.6 protein.folding mitochondrial chaperonin HSP.... 0.05 Gene family
Cre07.g339150 No alias 29.6 protein.folding TCP-1/cpn60 chaperonin family protein 0.07 Gene family
Cre17.g741450 No alias 1.3.13 PS.calvin cycle.rubisco interacting encodes the... 0.01 Gene family
GSVIVT01029025001 No alias 29.6 protein.folding mitochondrial chaperonin HSP.... 0.03 Gene family
LOC_Os03g04970 Os03g0143400 29.6 protein.folding mitochondrial chaperonin HSP.... 0.04 Gene family
LOC_Os06g02380 Os06g0114000 No description available 0.06 Gene family
LOC_Os09g38980 Os09g0563300 29.6 protein.folding embryo defective 3007 (EMB3007) 0.02 Gene family
LOC_Os10g32550 Os10g0462900 29.6 protein.folding mitochondrial chaperonin HSP.... 0.03 Gene family
LOC_Os12g17910 Os12g0277500 1.3.13 PS.calvin cycle.rubisco interacting Encodes... 0.01 Gene family
MA_10436324g0010 No alias 29.6 protein.folding mitochondrial chaperonin HSP.... 0.03 Gene family
MA_97627g0010 No alias 29.6 protein.folding TCP-1/cpn60 chaperonin family protein 0.03 Gene family
Smo165043 PACid_15410433 No description available 0.07 Gene family
Smo183479 PACid_15421964 No description available 0.04 Gene family
Solyc01g028810.3.1 Solyc01g028810.3 29.6 protein.folding TCP-1/cpn60 chaperonin family protein 0.03 Gene family
Solyc05g053470.3.1 Solyc05g053470.3 29.6 protein.folding mitochondrial chaperonin HSP.... 0.05 Gene family
Solyc09g091180.3.1 Solyc09g091180.3 29.6 protein.folding mitochondrial chaperonin HSP.... 0.07 Gene family
Solyc11g069790.2.1 Solyc11g069790.2 1.3.13 PS.calvin cycle.rubisco interacting Encodes... 0.03 Gene family
Zm00001d014090 GRMZM2G111477,... 29.6 protein.folding mitochondrial chaperonin HSP.... 0.06 Gene family
Zm00001d032789 GRMZM2G416120 29.6 protein.folding mitochondrial chaperonin HSP.... 0.03 Gene family
Zm00001d034919 GRMZM2G434173 1.3.13 PS.calvin cycle.rubisco interacting Encodes... 0.04 Gene family
Zm00001d035937 GRMZM2G095252,... No description available 0.02 Gene family
Zm00001d045544 GRMZM2G083716 29.6 protein.folding TCP-1/cpn60 chaperonin family protein 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 68 514
No external refs found!