GSVIVT01030018001


Description : 10.6.3 cell wall.degradation.pectate lyases and polygalacturonases Pectin lyase-like superfamily protein


Gene families : OG_01_0000381 (Gene family) Phylogenetic Tree(s): OG0000381_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): GSVIVT01030018001
Cluster HCCA cluster: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
Solyc01g009635.1.1 Solyc01g009635.1 10.6.3 cell wall.degradation.pectate lyases and... 0.02 Gene family
Zm00001d036818 GRMZM2G153666 10.6.3 cell wall.degradation.pectate lyases and... 0.02 Gene family
Zm00001d036824 GRMZM2G066675,... 10.6.3 cell wall.degradation.pectate lyases and... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA InterProScan
BP GO:0005975 carbohydrate metabolic process IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 55 382
No external refs found!