1. Home
  2. Species
  3. Nephrolepis biserrata
  4. Sequence
  5. Nbi_g01898

Nbi_g01898 (ATAB2)


Aliases : ATAB2

Description : not classified & original description: none


Gene families : OG0004008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004008_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g01898
Cluster HCCA: Cluster_165

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00103p00115980 ATAB2,... Protein TAB2 homolog, chloroplastic OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AT3G08010 ATAB2 RNA binding 0.04 OrthoFinder output from all 47 species
Adi_g014503 ATAB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g07833 ATAB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g09787 ATAB2 not classified & original description: none 0.12 OrthoFinder output from all 47 species
Als_g22462 ATAB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g04128 ATAB2 not classified & original description: none 0.1 OrthoFinder output from all 47 species
Aob_g04239 ATAB2 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g02871 ATAB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g31544 ATAB2 not classified & original description: none 0.13 OrthoFinder output from all 47 species
Aspi01Gene61714.t1 ATAB2, Aspi01Gene61714 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene61715.t1 ATAB2, Aspi01Gene61715 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0050.g031031 ATAB2 not classified & original description: CDS=196-1422 0.04 OrthoFinder output from all 47 species
Cba_g03154 ATAB2 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Cba_g27607 ATAB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.21G068300.1 ATAB2, Ceric.21G068300 not classified & original description: pacid=50604093... 0.07 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000622.21 No alias Protein TAB2 homolog, chloroplastic OS=Zea mays 0.01 OrthoFinder output from all 47 species
Cre17.g702500 ATAB2 Protein TAB2 homolog, chloroplastic OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Dac_g11792 ATAB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18139 ATAB2 not classified & original description: none 0.11 OrthoFinder output from all 47 species
Dcu_g14997 ATAB2 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g18747 ATAB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g04344 ATAB2 not classified & original description: none 0.1 OrthoFinder output from all 47 species
Dde_g16983 ATAB2 not classified & original description: none 0.14 OrthoFinder output from all 47 species
Ehy_g05805 ATAB2 not classified & original description: none 0.07 OrthoFinder output from all 47 species
GSVIVT01032129001 ATAB2 Protein TAB2 homolog, chloroplastic OS=Arabidopsis thaliana 0.13 OrthoFinder output from all 47 species
Gb_34984 ATAB2 Protein TAB2 homolog, chloroplastic OS=Arabidopsis... 0.11 OrthoFinder output from all 47 species
Gb_34986 ATAB2 Protein TAB2 homolog, chloroplastic OS=Oryza sativa... 0.05 OrthoFinder output from all 47 species
LOC_Os02g39740.1 ATAB2, LOC_Os02g39740 Protein TAB2 homolog, chloroplastic OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Len_g43889 ATAB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g01384 ATAB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g30744 ATAB2 not classified & original description: none 0.07 OrthoFinder output from all 47 species
MA_10430622g0010 ATAB2 Protein TAB2 homolog, chloroplastic OS=Zea mays... 0.06 OrthoFinder output from all 47 species
Mp1g14850.1 ATAB2 Protein TAB2 homolog, chloroplastic OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Msp_g02016 ATAB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g05869 ATAB2 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Pir_g02783 ATAB2 not classified & original description: none 0.13 OrthoFinder output from all 47 species
Pir_g10236 ATAB2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g03703 ATAB2 not classified & original description: none 0.16 OrthoFinder output from all 47 species
Ppi_g32398 ATAB2 not classified & original description: none 0.11 OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015277 ATAB2 not classified & original description: CDS=173-1390 0.04 OrthoFinder output from all 47 species
Sam_g10050 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g10068 ATAB2 not classified & original description: none 0.1 OrthoFinder output from all 47 species
Tin_g00858 ATAB2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g10787 ATAB2 not classified & original description: none 0.18 OrthoFinder output from all 47 species
Zm00001e015079_P001 ATAB2, Zm00001e015079 Protein TAB2 homolog, chloroplastic OS=Zea mays... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004751 ribose-5-phosphate isomerase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006536 glutamate metabolic process IEP HCCA
BP GO:0006537 glutamate biosynthetic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
MF GO:0015930 glutamate synthase activity IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042586 peptide deformylase activity IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
BP GO:0043650 dicarboxylic acid biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR046761 Tab2-like_C 160 374
IPR046760 Tab2-like_N 100 152
No external refs found!