GSVIVT01028474001


Description : 10.7 cell wall.modification member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio) expansin A25 (EXPA25)


Gene families : OG_01_0000017 (Gene family) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): GSVIVT01028474001
Cluster HCCA cluster: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AT1G12560 ATEXP7, EXPA7,... expansin A7 0.02 Gene family
AT1G20190 ATEXPA11, ATHEXP... expansin 11 0.03 Gene family
AT1G62980 EXPA18, EXP18,... expansin A18 0.02 Gene family
AT2G40610 EXPA8, ATHEXP... expansin A8 0.03 Gene family
AT5G39290 ATEXP26, ATHEXP... expansin A26 0.04 Gene family
GSVIVT01011437001 No alias 10.7 cell wall.modification Encodes an expansin. Naming... 0.03 Gene family
GSVIVT01030191001 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
GSVIVT01032681001 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
LOC_Os01g14660 Os01g0249100 10.7 cell wall.modification member of Alpha-Expansin... 0.04 Gene family
LOC_Os01g16770 Os01g0274500 10.7 cell wall.modification Encodes an expansin. Naming... 0.04 Gene family
LOC_Os02g16780 Os02g0267700 10.7 cell wall.modification member of Alpha-Expansin... 0.04 Gene family
LOC_Os03g06000 Os03g0155300 10.7 cell wall.modification member of Alpha-Expansin... 0.04 Gene family
LOC_Os03g06050 Os03g0156000 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
LOC_Os03g06060 Os03g0156300 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
LOC_Os03g31480 Os03g0428700 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
LOC_Os04g15840 Os04g0228400 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
LOC_Os05g39990 Os05g0477600 10.7 cell wall.modification Member of Alpha-Expansin... 0.01 Gene family
LOC_Os10g30330 Os10g0439100 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
LOC_Os10g30340 Os10g0439200 10.7 cell wall.modification member of Alpha-Expansin... 0.04 Gene family
MA_35592g0020 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.04 Gene family
MA_3618g0010 No alias 10.7 cell wall.modification Member of Alpha-Expansin... 0.02 Gene family
MA_61945g0010 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.01 Gene family
MA_86877g0010 No alias 10.7 cell wall.modification Member of Alpha-Expansin... 0.02 Gene family
MA_915221g0010 No alias 10.7 cell wall.modification Member of Alpha-Expansin... 0.02 Gene family
Smo143857 PACid_15418621 10.7 cell wall.modification member of Alpha-Expansin... 0.04 Gene family
Smo230202 PACid_15412224 10.7 cell wall.modification putative expansin. Naming... 0.02 Gene family
Smo75237 PACid_15411282 10.7 cell wall.modification Member of Alpha-Expansin... 0.03 Gene family
Smo90935 PACid_15416360 10.7 cell wall.modification Encodes an expansin. Naming... 0.02 Gene family
Solyc02g088100.3.1 Solyc02g088100.3 10.7 cell wall.modification Encodes an expansin. Naming... 0.02 Gene family
Solyc03g115270.2.1 Solyc03g115270.2 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
Solyc03g115300.2.1 Solyc03g115300.2 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
Solyc03g115310.1.1 Solyc03g115310.1 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
Solyc03g115890.3.1 Solyc03g115890.3 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
Solyc05g052245.1.1 Solyc05g052245.1 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
Solyc08g080060.3.1 Solyc08g080060.3 10.7 cell wall.modification Member of Alpha-Expansin... 0.02 Gene family
Solyc12g089380.2.1 Solyc12g089380.2 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
Zm00001d016022 GRMZM2G146540 10.7 cell wall.modification member of Alpha-Expansin... 0.04 Gene family
Zm00001d016054 GRMZM2G359799 10.7 cell wall.modification Member of Alpha-Expansin... 0.03 Gene family
Zm00001d027717 GRMZM2G173826 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
Zm00001d032881 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.04 Gene family
Zm00001d032882 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
Zm00001d032886 GRMZM2G414779 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
Zm00001d035102 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.04 Gene family
Zm00001d040247 GRMZM2G094523 10.7 cell wall.modification Member of Alpha-Expansin... 0.02 Gene family
Zm00001d040379 GRMZM2G149605 10.7 cell wall.modification member of Alpha-Expansin... 0.05 Gene family
Zm00001d048418 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007117 Expansin_CBD 150 226
IPR009009 RlpA-like_DPBB 55 138
No external refs found!