Ehy_g19075


Description : not classified & original description: none


Gene families : OG0001977 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001977_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g19075

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00119p00113390 evm_27.TU.AmTr_v1... Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT4G30100 No alias P-loop containing nucleoside triphosphate hydrolases... 0.04 OrthoFinder output from all 47 species
Cre03.g187950 No alias Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
GSVIVT01009001001 No alias Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Lfl_g13066 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g01517 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g16424 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g072830.4.1 Solyc04g072830 Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Solyc04g072840.3.1 Solyc04g072840 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR041679 DNA2/NAM7-like_C 1087 1285
IPR041677 DNA2/NAM7_AAA_11 716 1080
No external refs found!