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  5. Adi_g108757

Adi_g108757 (SPD1)


Aliases : SPD1

Description : not classified & original description: none


Gene families : OG0001410 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001410_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g108757
Cluster HCCA: Cluster_326

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00151130 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00099p00141900 evm_27.TU.AmTr_v1... No description available 0.01 OrthoFinder output from all 47 species
AT1G33290 No alias P-loop containing nucleoside triphosphate hydrolases... 0.04 OrthoFinder output from all 47 species
AT1G73170 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 OrthoFinder output from all 47 species
Aev_g12619 SPD1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g30094 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g02605 SPD1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g07290 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g15207 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18245 SPD1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g03538 SPD1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g15547 SPD1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.08G016100.1 Ceric.08G016100 not classified & original description: pacid=50637973... 0.04 OrthoFinder output from all 47 species
Ceric.34G074300.1 SPD1, Ceric.34G074300 not classified & original description: pacid=50622982... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001215.19 No alias No description available 0.05 OrthoFinder output from all 47 species
Dac_g01740 SPD1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g05731 SPD1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g11178 SPD1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g02694 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g18471 SPD1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os06g06190.1 LOC_Os06g06190 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os12g10640.1 LOC_Os12g10640 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Len_g18297 SPD1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
MA_10427944g0010 SPD1 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10433286g0010 SPD1 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10433691g0010 SPD1 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp5g22990.1 SPD1 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Nbi_g02253 SPD1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g10530 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g10298 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g08230 SPD1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g09739 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g48536 SPD1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g13769 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo410877 SPD1 No description available 0.04 OrthoFinder output from all 47 species
Solyc12g014150.3.1 Solyc12g014150 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g26580 SPD1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g13947 SPD1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e000530_P004 Zm00001e000530 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e030045_P004 Zm00001e030045 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004820 glycine-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006426 glycyl-tRNA aminoacylation IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0017038 protein import IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR045735 Spore_III_AA_AAA+_ATPase 199 325
No external refs found!