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  5. Adi_g107430

Adi_g107430 (THO2, AtTHO2)


Aliases : THO2, AtTHO2

Description : component *(THOC2/Tho2) of mRNP trafficking THO subcomplex & original description: none


Gene families : OG0003635 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003635_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g107430

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00138p00044110 THO2, AtTHO2,... RNA processing.messenger ribonucleoprotein particle... 0.04 OrthoFinder output from all 47 species
AT1G24706 THO2, AtTHO2 THO2 0.05 OrthoFinder output from all 47 species
Aev_g08657 THO2, AtTHO2 component *(THOC2/Tho2) of mRNP trafficking THO... 0.06 OrthoFinder output from all 47 species
Als_g01214 THO2, AtTHO2 component *(THOC2/Tho2) of mRNP trafficking THO... 0.02 OrthoFinder output from all 47 species
Aop_g07582 THO2, AtTHO2 component *(THOC2/Tho2) of mRNP trafficking THO... 0.02 OrthoFinder output from all 47 species
Aspi01Gene09828.t1 THO2, AtTHO2,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.19G073400.1 THO2, AtTHO2,... component *(THOC2/Tho2) of mRNP trafficking THO... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001428.15 THO2, AtTHO2 RNA processing.messenger ribonucleoprotein particle... 0.01 OrthoFinder output from all 47 species
Dcu_g02056 THO2, AtTHO2 component *(THOC2/Tho2) of mRNP trafficking THO... 0.04 OrthoFinder output from all 47 species
Dde_g04015 THO2, AtTHO2 component *(THOC2/Tho2) of mRNP trafficking THO... 0.04 OrthoFinder output from all 47 species
Ehy_g01710 THO2, AtTHO2 component *(THOC2/Tho2) of mRNP trafficking THO... 0.02 OrthoFinder output from all 47 species
GSVIVT01011619001 THO2, AtTHO2 RNA processing.messenger ribonucleoprotein particle... 0.06 OrthoFinder output from all 47 species
Gb_33812 THO2, AtTHO2 component THOC2/Tho2 of mRNP trafficking THO subcomplex 0.06 OrthoFinder output from all 47 species
LOC_Os01g68810.1 THO2, AtTHO2,... component THOC2/Tho2 of mRNP trafficking THO subcomplex 0.04 OrthoFinder output from all 47 species
Len_g01408 THO2, AtTHO2 component *(THOC2/Tho2) of mRNP trafficking THO... 0.03 OrthoFinder output from all 47 species
Lfl_g04297 THO2, AtTHO2 component *(THOC2/Tho2) of mRNP trafficking THO... 0.04 OrthoFinder output from all 47 species
MA_10430572g0010 THO2, AtTHO2 component THOC2/Tho2 of mRNP trafficking THO subcomplex 0.03 OrthoFinder output from all 47 species
Mp1g20320.1 THO2, AtTHO2 component THOC2/Tho2 of mRNP trafficking THO subcomplex 0.07 OrthoFinder output from all 47 species
Msp_g02102 THO2, AtTHO2 component *(THOC2/Tho2) of mRNP trafficking THO... 0.03 OrthoFinder output from all 47 species
Nbi_g01515 THO2, AtTHO2 component *(THOC2/Tho2) of mRNP trafficking THO... 0.04 OrthoFinder output from all 47 species
Ore_g16129 THO2, AtTHO2 component *(THOC2/Tho2) of mRNP trafficking THO... 0.11 OrthoFinder output from all 47 species
Ppi_g04007 THO2, AtTHO2 component *(THOC2/Tho2) of mRNP trafficking THO... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0104.g020047 THO2, AtTHO2 component *(THOC2/Tho2) of mRNP trafficking THO... 0.04 OrthoFinder output from all 47 species
Sam_g51475 No alias component *(THOC2/Tho2) of mRNP trafficking THO... 0.02 OrthoFinder output from all 47 species
Smo173562 THO2, AtTHO2 RNA processing.messenger ribonucleoprotein particle... 0.02 OrthoFinder output from all 47 species
Solyc05g017890.4.1 THO2, AtTHO2,... component THOC2/Tho2 of mRNP trafficking THO subcomplex 0.04 OrthoFinder output from all 47 species
Spa_g18725 THO2, AtTHO2 component *(THOC2/Tho2) of mRNP trafficking THO... 0.03 OrthoFinder output from all 47 species
Tin_g08678 THO2, AtTHO2 component *(THOC2/Tho2) of mRNP trafficking THO... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0006606 protein import into nucleus IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051170 import into nucleus IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
InterPro domains Description Start Stop
IPR021418 THO_THOC2_C 955 1249
IPR021726 THO_THOC2_N 636 711
IPR032302 THOC2_N 110 452
IPR032302 THOC2_N 478 634
IPR032302 THOC2_N 20 87
No external refs found!