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  5. Ehy_g18068

Ehy_g18068


Description : not classified & original description: none


Gene families : OG0007904 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007904_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g18068
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00242510 evm_27.TU.AmTr_v1... Thylakoid lumenal 19 kDa protein, chloroplastic... 0.04 OrthoFinder output from all 47 species
Adi_g039955 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Adi_g102973 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g04818 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g08877 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.10G010600.1 Ceric.10G010600 not classified & original description: pacid=50613083... 0.07 OrthoFinder output from all 47 species
Cre03.g198850 No alias Thylakoid lumenal 19 kDa protein, chloroplastic... 0.02 OrthoFinder output from all 47 species
Dcu_g07970 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dde_g23796 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os08g39430.1 LOC_Os08g39430 Thylakoid lumenal 19 kDa protein, chloroplastic... 0.06 OrthoFinder output from all 47 species
Len_g31505 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_132558g0010 No alias Thylakoid lumenal 19 kDa protein, chloroplastic... 0.03 OrthoFinder output from all 47 species
Mp2g02710.1 No alias Thylakoid lumenal 19 kDa protein, chloroplastic... 0.12 OrthoFinder output from all 47 species
Msp_g11612 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pp3c4_11800V3.1 Pp3c4_11800 Mog1/PsbP/DUF1795-like photosystem II reaction center... 0.04 OrthoFinder output from all 47 species
Ppi_g23945 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g11799 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g00522 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Zm00001e003510_P001 Zm00001e003510 Thylakoid lumenal 19 kDa protein, chloroplastic... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
CC GO:0009523 photosystem II IEA Interproscan
CC GO:0009654 photosystem II oxygen evolving complex IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0019898 extrinsic component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004820 glycine-tRNA ligase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006426 glycyl-tRNA aminoacylation IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
BP GO:0009767 photosynthetic electron transport chain IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016168 chlorophyll binding IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019684 photosynthesis, light reaction IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
MF GO:0030976 thiamine pyrophosphate binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0050997 quaternary ammonium group binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002683 PsbP_C 139 278
No external refs found!