Aliases : TUB1
Description : not classified & original description: none
Gene families : OG0000152 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000152_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00032p00056500 | TUB8,... | Cytoskeleton.microtubular network.alpha-beta-Tubulin... | 0.02 | OrthoFinder output from all 47 species | |
AT5G44340 | TUB4 | tubulin beta chain 4 | 0.02 | OrthoFinder output from all 47 species | |
Ala_g22693 | TUB2 | beta-Tubulin component *(TUB) of alpha-beta-Tubulin... | 0.03 | OrthoFinder output from all 47 species | |
Als_g10859 | TUB6 | beta-Tubulin component *(TUB) of alpha-beta-Tubulin... | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene08571.t1 | TUB6, Aspi01Gene08571 | beta-Tubulin component *(TUB) of alpha-beta-Tubulin... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.04G088300.1 | TUB8, Ceric.04G088300 | beta-Tubulin component *(TUB) of alpha-beta-Tubulin... | 0.03 | OrthoFinder output from all 47 species | |
Dac_g14313 | TUB2 | beta-Tubulin component *(TUB) of alpha-beta-Tubulin... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01037405001 | TUB2 | Tubulin beta-4 chain OS=Eleusine indica | 0.02 | OrthoFinder output from all 47 species | |
Gb_29799 | TUB6 | component beta-Tubulin of alpha-beta-Tubulin heterodimer | 0.03 | OrthoFinder output from all 47 species | |
Len_g06832 | TUB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g06065 | TUB6 | beta-Tubulin component *(TUB) of alpha-beta-Tubulin... | 0.03 | OrthoFinder output from all 47 species | |
MA_230579g0020 | TUB6 | component beta-Tubulin of alpha-beta-Tubulin heterodimer | 0.02 | OrthoFinder output from all 47 species | |
Msp_g29673 | TUB6 | beta-Tubulin component *(TUB) of alpha-beta-Tubulin... | 0.03 | OrthoFinder output from all 47 species | |
Smo164404 | TUB6 | Cytoskeleton.microtubular network.alpha-beta-Tubulin... | 0.03 | OrthoFinder output from all 47 species | |
Smo170592 | TUB6 | Cytoskeleton.microtubular network.alpha-beta-Tubulin... | 0.02 | OrthoFinder output from all 47 species | |
Solyc03g025730.3.1 | TUB8, Solyc03g025730 | component beta-Tubulin of alpha-beta-Tubulin heterodimer | 0.02 | OrthoFinder output from all 47 species | |
Solyc10g080940.3.1 | TUB6, Solyc10g080940 | component beta-Tubulin of alpha-beta-Tubulin heterodimer | 0.05 | OrthoFinder output from all 47 species | |
Spa_g54479 | TUB6 | beta-Tubulin component *(TUB) of alpha-beta-Tubulin... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e039740_P001 | TUB9, Zm00001e039740 | Tubulin beta-7 chain OS=Oryza sativa subsp. japonica... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e042329_P001 | TUB9, Zm00001e042329 | Tubulin beta-7 chain OS=Oryza sativa subsp. japonica... | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005525 | GTP binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000123 | histone acetyltransferase complex | IEP | HCCA |
CC | GO:0000124 | SAGA complex | IEP | HCCA |
MF | GO:0003712 | transcription coregulator activity | IEP | HCCA |
MF | GO:0003713 | transcription coactivator activity | IEP | HCCA |
MF | GO:0004674 | protein serine/threonine kinase activity | IEP | HCCA |
MF | GO:0004683 | calmodulin-dependent protein kinase activity | IEP | HCCA |
MF | GO:0005216 | monoatomic ion channel activity | IEP | HCCA |
MF | GO:0005516 | calmodulin binding | IEP | HCCA |
CC | GO:0005643 | nuclear pore | IEP | HCCA |
BP | GO:0006405 | RNA export from nucleus | IEP | HCCA |
BP | GO:0006406 | mRNA export from nucleus | IEP | HCCA |
BP | GO:0006810 | transport | IEP | HCCA |
BP | GO:0006913 | nucleocytoplasmic transport | IEP | HCCA |
BP | GO:0009891 | positive regulation of biosynthetic process | IEP | HCCA |
BP | GO:0009893 | positive regulation of metabolic process | IEP | HCCA |
BP | GO:0010557 | positive regulation of macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0010604 | positive regulation of macromolecule metabolic process | IEP | HCCA |
MF | GO:0015267 | channel activity | IEP | HCCA |
BP | GO:0015931 | nucleobase-containing compound transport | IEP | HCCA |
MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | HCCA |
MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | HCCA |
MF | GO:0022803 | passive transmembrane transporter activity | IEP | HCCA |
CC | GO:0031248 | protein acetyltransferase complex | IEP | HCCA |
BP | GO:0031325 | positive regulation of cellular metabolic process | IEP | HCCA |
BP | GO:0031328 | positive regulation of cellular biosynthetic process | IEP | HCCA |
BP | GO:0045893 | positive regulation of DNA-templated transcription | IEP | HCCA |
BP | GO:0045935 | positive regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0046907 | intracellular transport | IEP | HCCA |
BP | GO:0048518 | positive regulation of biological process | IEP | HCCA |
BP | GO:0048522 | positive regulation of cellular process | IEP | HCCA |
BP | GO:0050657 | nucleic acid transport | IEP | HCCA |
BP | GO:0050658 | RNA transport | IEP | HCCA |
BP | GO:0051028 | mRNA transport | IEP | HCCA |
BP | GO:0051168 | nuclear export | IEP | HCCA |
BP | GO:0051169 | nuclear transport | IEP | HCCA |
BP | GO:0051173 | positive regulation of nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0051179 | localization | IEP | HCCA |
BP | GO:0051234 | establishment of localization | IEP | HCCA |
BP | GO:0051236 | establishment of RNA localization | IEP | HCCA |
BP | GO:0051254 | positive regulation of RNA metabolic process | IEP | HCCA |
MF | GO:0051287 | NAD binding | IEP | HCCA |
BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
CC | GO:0070461 | SAGA-type complex | IEP | HCCA |
BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
CC | GO:1902493 | acetyltransferase complex | IEP | HCCA |
BP | GO:1902680 | positive regulation of RNA biosynthetic process | IEP | HCCA |
BP | GO:1903508 | positive regulation of nucleic acid-templated transcription | IEP | HCCA |
CC | GO:1905368 | peptidase complex | IEP | HCCA |
CC | GO:1990234 | transferase complex | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR003008 | Tubulin_FtsZ_GTPase | 32 | 143 |
No external refs found! |