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  5. Adi_g087292

Adi_g087292


Description : not classified & original description: none


Gene families : OG0000714 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000714_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g087292

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00236130 evm_27.TU.AmTr_v1... RNA processing.ribonuclease activities.RNase P... 0.02 OrthoFinder output from all 47 species
AMTR_s00067p00150350 evm_27.TU.AmTr_v1... RNA processing.ribonuclease activities.RNase P... 0.02 OrthoFinder output from all 47 species
Adi_g087296 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g04502 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08846 No alias component *(RPP25/POP6) or RPP20/POP7 of RNA-dependent... 0.02 OrthoFinder output from all 47 species
Aop_g14670 No alias component *(RPP25/POP6) or RPP20/POP7 of RNA-dependent... 0.03 OrthoFinder output from all 47 species
Azfi_s0007.g010566 No alias not classified & original description: CDS=50-838 0.03 OrthoFinder output from all 47 species
Msp_g03122 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g04393 No alias component *(RPP25/POP6) or RPP20/POP7 of RNA-dependent... 0.01 OrthoFinder output from all 47 species
Msp_g24953 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g03477 No alias component *(RPP25/POP6) or RPP20/POP7 of RNA-dependent... 0.02 OrthoFinder output from all 47 species
Nbi_g04614 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g31238 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02473 No alias component *(RPP25/POP6) or RPP20/POP7 of RNA-dependent... 0.03 OrthoFinder output from all 47 species
Sam_g08254 No alias component *(RPP25/POP6) or RPP20/POP7 of RNA-dependent... 0.02 OrthoFinder output from all 47 species
Solyc06g083540.4.1 Solyc06g083540 component RPP25/POP6 | RPP20/POP7 of RNA-dependent RNase... 0.02 OrthoFinder output from all 47 species
Solyc09g091590.3.1 Solyc09g091590 component RPP25/POP6 | RPP20/POP7 of RNA-dependent RNase... 0.02 OrthoFinder output from all 47 species
Spa_g24852 No alias component *(RPP25/POP6) or RPP20/POP7 of RNA-dependent... 0.03 OrthoFinder output from all 47 species
Zm00001e012088_P003 Zm00001e012088 component RPP25/POP6 | RPP20/POP7 of RNA-dependent RNase... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0046903 secretion IEP HCCA
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR002775 DNA/RNA-bd_Alba-like 19 80
No external refs found!