- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : not classified & original description: none
Gene families : OG0000142 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000142_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00002p00205450 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At3g25210,... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00019p00236380 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At3g61360... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00078p00045650 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At1g52640,... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00119p00084460 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At2g27800,... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00131p00098210 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At1g13040,... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G71060 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT1G73400 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT3G16010 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT5G15010 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g013918 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g22080 | EMB2261 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g54972 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g12835 | No alias | group-II intron mitochondrial splicing factor *(MISF68)... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g31482 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g20505 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g78360 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.03G098700.1 | Ceric.03G098700 | not classified & original description: pacid=50572397... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.24G045100.1 | Ceric.24G045100 | not classified & original description: pacid=50628969... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g07022 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g07047 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g10060 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g11222 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g03049 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g07270 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g50968 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01008815001 | No alias | Pentatricopeptide repeat-containing protein At1g77360,... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01015982001 | No alias | Pentatricopeptide repeat-containing protein At1g80880,... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01017111001 | No alias | Pentatricopeptide repeat-containing protein At3g16010... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01017293001 | No alias | Pentatricopeptide repeat-containing protein At1g52640,... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01026463001 | No alias | Pentatricopeptide repeat-containing protein At2g13420,... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01027388001 | No alias | Pentatricopeptide repeat-containing protein At1g80550,... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g05860.1 | LOC_Os01g05860 | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g52220.1 | LOC_Os02g52220 | Pentatricopeptide repeat-containing protein At1g73400,... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os08g17080.1 | LOC_Os08g17080 | Pentatricopeptide repeat-containing protein At1g80880,... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g01806 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g06036 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g11461 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g28170 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_12748g0020 | No alias | Pentatricopeptide repeat-containing protein At1g79540... | 0.02 | OrthoFinder output from all 47 species | |
| MA_355286g0010 | No alias | Pentatricopeptide repeat-containing protein At5g15010,... | 0.02 | OrthoFinder output from all 47 species | |
| MA_8206159g0010 | No alias | Pentatricopeptide repeat-containing protein At5g15010,... | 0.02 | OrthoFinder output from all 47 species | |
| MA_953698g0010 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g08820 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g27283 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g16371 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g01365 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g29941 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0017.g007283 | No alias | not classified & original description: CDS=1-1626 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0062.g015602 | No alias | not classified & original description: CDS=6-1427 | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g097840.2.1 | Solyc09g097840 | Pentatricopeptide repeat-containing protein At5g18390,... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g10895 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g12536 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g06924 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g10641 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e005446_P003 | Zm00001e005446 | group-II intron mitochondrial splicing factor (MISF68) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e006773_P001 | Zm00001e006773 | Pentatricopeptide repeat-containing protein At1g80550,... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e036197_P001 | Zm00001e036197 | Pentatricopeptide repeat-containing protein At1g71060,... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| No external refs found! |