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  5. Adi_g059761

Adi_g059761


Description : scaffold component *(FRY) of RAM signalling pathway & original description: none


Gene families : OG0004160 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004160_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g059761

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00151870 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT5G15680 No alias ARM repeat superfamily protein 0.06 OrthoFinder output from all 47 species
Ala_g02730 No alias scaffold component *(FRY) of RAM signalling pathway &... 0.04 OrthoFinder output from all 47 species
Cba_g02118 No alias scaffold component *(FRY) of RAM signalling pathway &... 0.03 OrthoFinder output from all 47 species
Ceric.1Z029100.1 Ceric.1Z029100 scaffold component *(FRY) of RAM signalling pathway &... 0.04 OrthoFinder output from all 47 species
Cre17.g703750 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g04159 No alias scaffold component *(FRY) of RAM signalling pathway &... 0.07 OrthoFinder output from all 47 species
Ehy_g24660 No alias scaffold component *(FRY) of RAM signalling pathway &... 0.03 OrthoFinder output from all 47 species
GSVIVT01036514001 No alias No description available 0.1 OrthoFinder output from all 47 species
Gb_24208 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os02g58410.1 LOC_Os02g58410 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Len_g30743 No alias scaffold component *(FRY) of RAM signalling pathway &... 0.02 OrthoFinder output from all 47 species
MA_10435894g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10436406g0020 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Ore_g25800 No alias scaffold component *(FRY) of RAM signalling pathway &... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015028 No alias scaffold component *(FRY) of RAM signalling pathway &... 0.05 OrthoFinder output from all 47 species
Sam_g29289 No alias scaffold component *(FRY) of RAM signalling pathway &... 0.03 OrthoFinder output from all 47 species
Smo84835 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc02g089370.2.1 Solyc02g089370 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc02g089390.3.1 Solyc02g089390 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
MF GO:0031369 translation initiation factor binding IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR025481 Cell_Morphogen_C 1796 2083
IPR029473 MOR2-PAG1_mid 666 1771
IPR025614 Cell_morpho_N 86 627
No external refs found!