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  5. Adi_g059258

Adi_g059258


Description : not classified & original description: none


Gene families : OG0000898 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000898_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g059258

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00134410 evm_27.TU.AmTr_v1... FRIGIDA-like protein 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT5G48385 No alias FRIGIDA-like protein 0.02 OrthoFinder output from all 47 species
Adi_g016137 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g19277 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03630 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g21938 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os07g40270.1 LOC_Os07g40270 FRIGIDA-like protein 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os09g07360.1 LOC_Os09g07360 FRIGIDA-like protein 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os09g07380.1 LOC_Os09g07380 FRIGIDA-like protein 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g00673 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_105292g0010 No alias FRIGIDA-like protein 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Ore_g04962 FRL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g06621 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g10001 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19044 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g21009 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g25145 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g25233 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g33211 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g33978 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14695 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03087 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0231.g026441 No alias not classified & original description: CDS=224-2032 0.02 OrthoFinder output from all 47 species
Sam_g24376 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g09351 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g12674 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g39887 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06038 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003724 RNA helicase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006368 transcription elongation by RNA polymerase II IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
CC GO:0008023 transcription elongation factor complex IEP HCCA
MF GO:0008186 ATP-dependent activity, acting on RNA IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016570 histone modification IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
CC GO:0016593 Cdc73/Paf1 complex IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR012474 Frigida 165 446
No external refs found!