1. Home
  2. Species
  3. Actinostachys digitata
  4. Sequence
  5. Adi_g057084

Adi_g057084


Description : not classified & original description: none


Gene families : OG0000043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g057084

Target Alias Description ECC score Gene Family Method Actions
Adi_g002453 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g025493 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g055309 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g058520 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g085074 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g02644 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g07513 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24243 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g38619 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05715 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07076 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07419 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07485 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18219 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18812 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19289 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g26692 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g30593 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g30602 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g32527 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g54731 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g55255 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55301 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g55312 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g12298 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08925 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13235 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g26474 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g31319 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0131.g049164 No alias not classified & original description: CDS=1-2763 0.02 OrthoFinder output from all 47 species
Azfi_s0250.g060258 No alias not classified & original description: CDS=1-1893 0.02 OrthoFinder output from all 47 species
Azfi_s0345.g065805 No alias not classified & original description: CDS=1-2679 0.02 OrthoFinder output from all 47 species
Azfi_s0469.g072874 CRR22 not classified & original description: CDS=1-1206 0.02 OrthoFinder output from all 47 species
Azfi_s1399.g102577 No alias not classified & original description: CDS=1-951 0.02 OrthoFinder output from all 47 species
Cba_g05221 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g05296 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05321 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g06533 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07456 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20804 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20860 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20867 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67208 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75131 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75342 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g75378 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G104800.1 Ceric.04G104800 not classified & original description: pacid=50632059... 0.03 OrthoFinder output from all 47 species
Ceric.05G023100.1 Ceric.05G023100 not classified & original description: pacid=50578135... 0.03 OrthoFinder output from all 47 species
Ceric.06G051200.1 CRR22, Ceric.06G051200 not classified & original description: pacid=50620844... 0.03 OrthoFinder output from all 47 species
Ceric.12G021700.1 Ceric.12G021700 not classified & original description: pacid=50601871... 0.03 OrthoFinder output from all 47 species
Ceric.15G076300.1 Ceric.15G076300 not classified & original description: pacid=50639367... 0.03 OrthoFinder output from all 47 species
Ceric.18G038700.1 Ceric.18G038700 not classified & original description: pacid=50621594... 0.03 OrthoFinder output from all 47 species
Ceric.18G062200.1 Ceric.18G062200 not classified & original description: pacid=50622099... 0.04 OrthoFinder output from all 47 species
Ceric.19G039900.1 Ceric.19G039900 not classified & original description: pacid=50575946... 0.03 OrthoFinder output from all 47 species
Ceric.19G052100.1 Ceric.19G052100 not classified & original description: pacid=50575616... 0.03 OrthoFinder output from all 47 species
Ceric.23G037900.1 Ceric.23G037900 not classified & original description: pacid=50609724... 0.04 OrthoFinder output from all 47 species
Ceric.27G014200.1 Ceric.27G014200 not classified & original description: pacid=50605189... 0.04 OrthoFinder output from all 47 species
Ceric.33G035100.1 Ceric.33G035100 not classified & original description: pacid=50606945... 0.06 OrthoFinder output from all 47 species
Ceric.36G034200.1 Ceric.36G034200 not classified & original description: pacid=50568019... 0.03 OrthoFinder output from all 47 species
Ceric.37G017500.1 VAC1, ECB2,... ssDNA-binding protein *(OSB) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.37G043200.1 Ceric.37G043200 not classified & original description: pacid=50616612... 0.02 OrthoFinder output from all 47 species
Dac_g35455 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g02319 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g02322 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g02346 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g02401 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05383 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g06991 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16765 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g19719 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22719 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23648 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24117 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24777 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26407 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26582 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g37689 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46473 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g51784 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g07441 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g07924 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g19629 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g20657 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g23238 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g23534 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05005 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05010 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06175 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06274 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06741 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07112 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g27953 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g33060 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g06113 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g22778 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31531 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g37831 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g45899 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g48582 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g48641 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g16901 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g17001 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g18405 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g25433 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g39340 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g07034 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g07232 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g18166 DOT4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g19560 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g28478 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63518 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02232 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g03867 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03887 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05188 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g11351 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g15092 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g18662 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18868 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g18921 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g39263 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g63140 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g12591 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g17285 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g23060 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g27535 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g35287 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g39858 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g40247 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g40590 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g04234 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g08784 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18112 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18575 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g18788 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23501 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30946 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g40875 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g04035 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08667 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09941 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09995 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g14554 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
BP GO:0015969 guanosine tetraphosphate metabolic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR046848 E_motif 1307 1341
IPR002885 Pentatricopeptide_repeat 625 655
IPR002885 Pentatricopeptide_repeat 742 772
IPR002885 Pentatricopeptide_repeat 831 850
IPR002885 Pentatricopeptide_repeat 1165 1187
IPR002885 Pentatricopeptide_repeat 1092 1120
IPR002885 Pentatricopeptide_repeat 488 509
IPR002885 Pentatricopeptide_repeat 597 621
IPR002885 Pentatricopeptide_repeat 1230 1258
IPR002885 Pentatricopeptide_repeat 1193 1221
IPR002885 Pentatricopeptide_repeat 514 560
IPR002885 Pentatricopeptide_repeat 183 229
IPR002885 Pentatricopeptide_repeat 398 444
IPR002885 Pentatricopeptide_repeat 859 905
IPR002885 Pentatricopeptide_repeat 280 329
IPR002885 Pentatricopeptide_repeat 975 1021
No external refs found!