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  5. Adi_g056043

Adi_g056043 (TPL, WSIP1)


Aliases : TPL, WSIP1

Description : transcriptional co-repressor *(TPL/TPR) & original description: none


Gene families : OG0000427 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000427_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g056043

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00051p00079490 TPR1,... RNA biosynthesis.transcriptional repression.TPL/TPR... 0.02 OrthoFinder output from all 47 species
AT1G15750 TPL, WSIP1 Transducin family protein / WD-40 repeat family protein 0.04 OrthoFinder output from all 47 species
Adi_g023932 TPL, WSIP1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g18277 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.04 OrthoFinder output from all 47 species
Als_g26654 TPR1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g43720 TPL, WSIP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g17933 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.02 OrthoFinder output from all 47 species
Aob_g27611 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0207.g057893 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.03 OrthoFinder output from all 47 species
Cba_g61200 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.02 OrthoFinder output from all 47 species
Ceric.07G013800.1 TPL, WSIP1,... transcriptional co-repressor *(TPL/TPR) & original... 0.04 OrthoFinder output from all 47 species
Ceric.08G073000.1 TPL, WSIP1,... transcriptional co-repressor *(TPL/TPR) & original... 0.02 OrthoFinder output from all 47 species
Dac_g14665 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.04 OrthoFinder output from all 47 species
Dac_g20506 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.04 OrthoFinder output from all 47 species
Ehy_g07917 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01015571001 WSIP2, TPR4 RNA biosynthesis.transcriptional repression.TPL/TPR... 0.02 OrthoFinder output from all 47 species
GSVIVT01031186001 TPR3 RNA biosynthesis.transcriptional repression.TPL/TPR... 0.05 OrthoFinder output from all 47 species
Gb_32130 TPL, WSIP1 transcriptional repressor (TPL). transcriptional... 0.05 OrthoFinder output from all 47 species
Gb_37153 TPL, WSIP1 transcriptional repressor (TPL). transcriptional... 0.03 OrthoFinder output from all 47 species
LOC_Os03g14980.1 TPR1, LOC_Os03g14980 transcriptional repressor (TPL). transcriptional... 0.02 OrthoFinder output from all 47 species
Len_g10333 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.03 OrthoFinder output from all 47 species
Len_g18065 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.02 OrthoFinder output from all 47 species
MA_16979g0020 TPL, WSIP1 Topless-related protein 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g32244 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.03 OrthoFinder output from all 47 species
Sam_g26704 No alias transcriptional co-repressor *(TPL/TPR) & original... 0.03 OrthoFinder output from all 47 species
Smo163891 TPR1 RNA biosynthesis.transcriptional repression.TPL/TPR... 0.03 OrthoFinder output from all 47 species
Smo439915 TPR1 RNA biosynthesis.transcriptional repression.TPL/TPR... 0.04 OrthoFinder output from all 47 species
Solyc03g116750.3.1 WSIP2, TPR4,... transcriptional repressor (TPL). transcriptional... 0.02 OrthoFinder output from all 47 species
Solyc08g076030.3.1 TPL, WSIP1,... transcriptional repressor (TPL). transcriptional... 0.03 OrthoFinder output from all 47 species
Spa_g07978 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.02 OrthoFinder output from all 47 species
Spa_g39057 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.03 OrthoFinder output from all 47 species
Spa_g45611 TPR1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e001080_P001 TPR1, Zm00001e001080 transcriptional repressor (TPL). transcriptional... 0.02 OrthoFinder output from all 47 species
Zm00001e038558_P003 TPR1, Zm00001e038558 transcriptional repressor (TPL). transcriptional... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 454 488
IPR001680 WD40_repeat 493 531
No external refs found!