Aliases : VALRS, TWN2
Description : EC_6.1 ligase forming carbon-oxygen bond & original description: none
Gene families : OG0001685 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001685_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00038p00088230 | VALRS, TWN2,... | Protein biosynthesis.aminoacyl-tRNA synthetase... | 0.03 | OrthoFinder output from all 47 species | |
AT1G14610 | VALRS, TWN2 | valyl-tRNA synthetase / valine--tRNA ligase (VALRS) | 0.02 | OrthoFinder output from all 47 species | |
Aob_g02362 | VALRS, TWN2 | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.05 | OrthoFinder output from all 47 species | |
Azfi_s0114.g046119 | VALRS, TWN2 | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.02 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000402.37 | EMB2247 | Protein biosynthesis.aminoacyl-tRNA synthetase... | 0.01 | OrthoFinder output from all 47 species | |
Dde_g26392 | VALRS, TWN2 | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01010632001 | VALRS, TWN2 | Protein biosynthesis.aminoacyl-tRNA synthetase... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01030775001 | EMB2247 | Protein biosynthesis.aminoacyl-tRNA synthetase... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01030776001 | EMB2247 | Valine--tRNA ligase, chloroplastic/mitochondrial 2... | 0.01 | OrthoFinder output from all 47 species | |
LOC_Os03g48850.1 | VALRS, TWN2,... | valine-tRNA ligase | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g09029 | VALRS, TWN2 | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.04 | OrthoFinder output from all 47 species | |
MA_583090g0010 | VALRS, TWN2 | Valine--tRNA ligase, mitochondrial 1 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g56587 | EMB2247 | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.03 | OrthoFinder output from all 47 species | |
Solyc09g007540.3.1 | VALRS, TWN2,... | valine-tRNA ligase | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e010301_P002 | VALRS, TWN2,... | valine-tRNA ligase | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEA | Interproscan |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003712 | transcription coregulator activity | IEP | HCCA |
MF | GO:0003714 | transcription corepressor activity | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0004518 | nuclease activity | IEP | HCCA |
MF | GO:0004527 | exonuclease activity | IEP | HCCA |
MF | GO:0004540 | ribonuclease activity | IEP | HCCA |
MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
MF | GO:0008408 | 3'-5' exonuclease activity | IEP | HCCA |
BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
BP | GO:0016567 | protein ubiquitination | IEP | HCCA |
MF | GO:0016787 | hydrolase activity | IEP | HCCA |
MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | HCCA |
MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
MF | GO:0019899 | enzyme binding | IEP | HCCA |
BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
MF | GO:0031625 | ubiquitin protein ligase binding | IEP | HCCA |
BP | GO:0032446 | protein modification by small protein conjugation | IEP | HCCA |
BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
MF | GO:0044389 | ubiquitin-like protein ligase binding | IEP | HCCA |
BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
No external refs found! |