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Aliases : SKL2
Description : not classified & original description: none
Gene families : OG0007627 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007627_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Adi_g050002 | |
| Cluster | HCCA: Cluster_260 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00048p00123660 | SKL2,... | Probable inactive shikimate kinase like 2, chloroplastic... | 0.04 | OrthoFinder output from all 47 species | |
| AT2G35500 | SKL2 | shikimate kinase like 2 | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g21027 | SKL2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g27474 | SKL2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g18462 | SKL2 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.04G066700.1 | SKL2, Ceric.04G066700 | not classified & original description: pacid=50632352... | 0.04 | OrthoFinder output from all 47 species | |
| Cre16.g659850 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g18069 | SKL2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os10g42700.1 | SKL2, LOC_Os10g42700 | Probable inactive shikimate kinase like 2, chloroplastic... | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g01171 | SKL2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_10096g0010 | SKL2 | Probable inactive shikimate kinase like 2, chloroplastic... | 0.04 | OrthoFinder output from all 47 species | |
| Mp3g07860.1 | SKL2 | Probable inactive shikimate kinase like 2, chloroplastic... | 0.01 | OrthoFinder output from all 47 species | |
| Msp_g06547 | SKL2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g05232 | SKL2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g20217 | SKL2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g08955 | SKL2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g17206 | SKL2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c12_17740V3.1 | SKL2, Pp3c12_17740 | shikimate kinase like 2 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0165.g024110 | SKL2 | not classified & original description: CDS=138-1466 | 0.03 | OrthoFinder output from all 47 species | |
| Solyc08g076410.4.1 | SKL2, Solyc08g076410 | Probable inactive shikimate kinase like 2, chloroplastic... | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g16044 | SKL2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g20827 | SKL2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e002481_P001 | SKL2, Zm00001e002481 | Probable inactive shikimate kinase like 2, chloroplastic... | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
| BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0006413 | translational initiation | IEP | HCCA |
| BP | GO:0006605 | protein targeting | IEP | HCCA |
| BP | GO:0006612 | protein targeting to membrane | IEP | HCCA |
| BP | GO:0006613 | cotranslational protein targeting to membrane | IEP | HCCA |
| BP | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | IEP | HCCA |
| BP | GO:0006979 | response to oxidative stress | IEP | HCCA |
| BP | GO:0008104 | protein localization | IEP | HCCA |
| BP | GO:0008380 | RNA splicing | IEP | HCCA |
| BP | GO:0015031 | protein transport | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | HCCA |
| MF | GO:0016636 | oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | HCCA |
| MF | GO:0016884 | carbon-nitrogen ligase activity, with glutamine as amido-N-donor | IEP | HCCA |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
| BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
| BP | GO:0033036 | macromolecule localization | IEP | HCCA |
| BP | GO:0033365 | protein localization to organelle | IEP | HCCA |
| MF | GO:0044183 | protein folding chaperone | IEP | HCCA |
| BP | GO:0045047 | protein targeting to ER | IEP | HCCA |
| BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
| BP | GO:0051641 | cellular localization | IEP | HCCA |
| BP | GO:0051668 | localization within membrane | IEP | HCCA |
| MF | GO:0051743 | red chlorophyll catabolite reductase activity | IEP | HCCA |
| MF | GO:0070569 | uridylyltransferase activity | IEP | HCCA |
| BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
| BP | GO:0070972 | protein localization to endoplasmic reticulum | IEP | HCCA |
| BP | GO:0071702 | organic substance transport | IEP | HCCA |
| BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
| BP | GO:0072594 | establishment of protein localization to organelle | IEP | HCCA |
| BP | GO:0072599 | establishment of protein localization to endoplasmic reticulum | IEP | HCCA |
| BP | GO:0072657 | protein localization to membrane | IEP | HCCA |
| BP | GO:0090150 | establishment of protein localization to membrane | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
| MF | GO:0140662 | ATP-dependent protein folding chaperone | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR031322 | Shikimate/glucono_kinase | 200 | 287 |
| No external refs found! |