Description : component *(TRM732) of TRM7-TRM732/TRM734 tRNA cytidine/guanosine-methyltransferase complex & original description: none
Gene families : OG0006426 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006426_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Ehy_g12389 | |
Cluster | HCCA: Cluster_35 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT3G55160 | No alias | unknown protein; EXPRESSED IN: 11 plant structures;... | 0.04 | OrthoFinder output from all 47 species | |
Aob_g33335 | No alias | component *(TRM732) of TRM7-TRM732/TRM734 tRNA... | 0.02 | OrthoFinder output from all 47 species | |
Cba_g74571 | No alias | component *(TRM732) of TRM7-TRM732/TRM734 tRNA... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.12G034300.1 | Ceric.12G034300 | component *(TRM732) of TRM7-TRM732/TRM734 tRNA... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os08g07290.1 | LOC_Os08g07290 | component TRM732 of TRM7-TRM732/TRM734 tRNA... | 0.03 | OrthoFinder output from all 47 species | |
Len_g48843 | No alias | component *(TRM732) of TRM7-TRM732/TRM734 tRNA... | 0.05 | OrthoFinder output from all 47 species | |
Ore_g33228 | No alias | component *(TRM732) of TRM7-TRM732/TRM734 tRNA... | 0.08 | OrthoFinder output from all 47 species | |
Solyc03g062650.3.1 | Solyc03g062650 | component TRM732 of TRM7-TRM732/TRM734 tRNA... | 0.04 | OrthoFinder output from all 47 species | |
Tin_g15052 | No alias | component *(TRM732) of TRM7-TRM732/TRM734 tRNA... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e040139_P001 | Zm00001e040139 | component TRM732 of TRM7-TRM732/TRM734 tRNA... | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000160 | phosphorelay signal transduction system | IEP | HCCA |
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
MF | GO:0008270 | zinc ion binding | IEP | HCCA |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
BP | GO:0035556 | intracellular signal transduction | IEP | HCCA |
BP | GO:0043038 | amino acid activation | IEP | HCCA |
BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
MF | GO:0043169 | cation binding | IEP | HCCA |
MF | GO:0046872 | metal ion binding | IEP | HCCA |
MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR019442 | THADA/TRM732_DUF2428 | 1150 | 1473 |
No external refs found! |