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  5. Ehy_g12341

Ehy_g12341 (PDE181, ZDS, SPC1)


Aliases : PDE181, ZDS, SPC1

Description : zeta-carotene desaturase *(ZDS) & original description: none


Gene families : OG0004455 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004455_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g12341
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00068p00029180 PDE181, ZDS,... Secondary metabolism.terpenoids.terpenoid... 0.02 OrthoFinder output from all 47 species
Aop_g21819 PDE181, ZDS, SPC1 zeta-carotene desaturase *(ZDS) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.37G066700.1 PDE181, ZDS,... zeta-carotene desaturase *(ZDS) & original description:... 0.03 OrthoFinder output from all 47 species
Cre07.g314150 PDE181, ZDS, SPC1 Secondary metabolism.terpenoids.terpenoid... 0.02 OrthoFinder output from all 47 species
Dac_g43255 PDE181, ZDS, SPC1 zeta-carotene desaturase *(ZDS) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g13728 PDE181, ZDS, SPC1 zeta-carotene desaturase *(ZDS) & original description: none 0.04 OrthoFinder output from all 47 species
MA_516g0010 PDE181, ZDS, SPC1 Zeta-carotene desaturase, chloroplastic/chromoplastic... 0.02 OrthoFinder output from all 47 species
Mp5g14090.1 PDE181, ZDS, SPC1 zeta-carotene desaturase (ZDS) 0.02 OrthoFinder output from all 47 species
Pir_g14877 PDE181, ZDS, SPC1 zeta-carotene desaturase *(ZDS) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g07998 PDE181, ZDS, SPC1 zeta-carotene desaturase *(ZDS) & original description: none 0.05 OrthoFinder output from all 47 species
Pp3c17_7790V3.1 PDE181, ZDS,... zeta-carotene desaturase 0.01 OrthoFinder output from all 47 species
Sam_g25901 No alias zeta-carotene desaturase *(ZDS) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g097810.3.1 PDE181, ZDS,... zeta-carotene desaturase (ZDS) 0.03 OrthoFinder output from all 47 species
Spa_g18923 PDE181, ZDS, SPC1 zeta-carotene desaturase *(ZDS) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR002937 Amino_oxidase 95 559
No external refs found!