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  5. Adi_g039955

Adi_g039955


Description : not classified & original description: none


Gene families : OG0007904 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007904_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g039955
Cluster HCCA: Cluster_274

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00242510 evm_27.TU.AmTr_v1... Thylakoid lumenal 19 kDa protein, chloroplastic... 0.08 OrthoFinder output from all 47 species
Aev_g02953 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g04818 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.10G010600.1 Ceric.10G010600 not classified & original description: pacid=50613083... 0.08 OrthoFinder output from all 47 species
Dac_g16656 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g07970 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dde_g23796 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18068 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Gb_20026 No alias Thylakoid lumenal 19 kDa protein, chloroplastic... 0.08 OrthoFinder output from all 47 species
LOC_Os08g39430.1 LOC_Os08g39430 Thylakoid lumenal 19 kDa protein, chloroplastic... 0.07 OrthoFinder output from all 47 species
Len_g31505 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Lfl_g00701 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_132558g0010 No alias Thylakoid lumenal 19 kDa protein, chloroplastic... 0.07 OrthoFinder output from all 47 species
Mp2g02710.1 No alias Thylakoid lumenal 19 kDa protein, chloroplastic... 0.12 OrthoFinder output from all 47 species
Msp_g11612 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g11064 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c4_11800V3.1 Pp3c4_11800 Mog1/PsbP/DUF1795-like photosystem II reaction center... 0.03 OrthoFinder output from all 47 species
Ppi_g23945 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Sacu_v1.1_s0070.g016709 No alias not classified & original description: CDS=1-780 0.03 OrthoFinder output from all 47 species
Solyc01g087040.2.1 Solyc01g087040 Thylakoid lumenal 19 kDa protein, chloroplastic... 0.03 OrthoFinder output from all 47 species
Spa_g11799 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g16540 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g00522 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Zm00001e003510_P001 Zm00001e003510 Thylakoid lumenal 19 kDa protein, chloroplastic... 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
CC GO:0009523 photosystem II IEA Interproscan
CC GO:0009654 photosystem II oxygen evolving complex IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0019898 extrinsic component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004618 phosphoglycerate kinase activity IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0010206 photosystem II repair IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0030091 protein repair IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR002683 PsbP_C 119 260
No external refs found!