Adi_g034248 (PDR4, ATPDR4)

Aliases : PDR4, ATPDR4

Description : subfamily ABCG transporter & original description: none

Gene families : OG0000071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Adi_g034248

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00056p00117010	PEN3, ABCG36,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
Adi_g055702	PEN3, ABCG36,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Als_g38727	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g14195	PEN3, ABCG36,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g65335	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene02131.t1	PEN3, ABCG36,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene02142.t1	PEN3, ABCG36,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene28060.t1	ABCG40, PDR12,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0232.g059286	PEN3, ABCG36,...	subfamily ABCG transporter & original description: CDS=735-5249	0.03	OrthoFinder output from all 47 species
Ceric.03G077000.1	PEN3, ABCG36,...	subfamily ABCG transporter & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.19G065500.1	PDR11, ATPDR11,...	subfamily ABCG transporter & original description:...	0.03	OrthoFinder output from all 47 species
Dac_g09408	PEN3, ABCG36,...	subfamily ABCG transporter & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g11270	PEN3, ABCG36,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01031378001	PDR11, ATPDR11	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
GSVIVT01034748001	PDR11, ATPDR11	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
Gb_05443	ABCG40, PDR12,...	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
LOC_Os02g11760.1	ABCG40, PDR12,...	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
LOC_Os02g32690.1	PIS1, ABCG37,...	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
LOC_Os09g16449.1	ABCG40, PDR12,...	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
LOC_Os12g32820.1	ATPDR5, PDR5,...	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
MA_10348400g0010	PDR1, ATPDR1	ABC transporter G family member 29 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
MA_10425791g0020	ABCG40, PDR12,...	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
MA_10427683g0010	PEN3, ABCG36,...	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
MA_911577g0010	PDR1, ATPDR1	ABC transporter G family member 36 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Mp8g09300.1	PEN3, ABCG36,...	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
Nbi_g01506	PEN3, ABCG36,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g013064	ABCG40, PDR12,...	subfamily ABCG transporter & original description: CDS=213-3857	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0071.g016875	ATPDR3, PDR3	subfamily ABCG transporter & original description: CDS=1-2793	0.03	OrthoFinder output from all 47 species
Solyc08g067610.3.1	ABCG40, PDR12,...	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
Spa_g28903	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g08759	PEN3, ABCG36,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e014497_P001	ABCG40, PDR12,...	ABC transporter G family member 39 OS=Oryza sativa...	0.02	OrthoFinder output from all 47 species
Zm00001e020666_P001	ABCG40, PDR12,...	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
MF	GO:0005215	transporter activity	IEP	HCCA
MF	GO:0005216	monoatomic ion channel activity	IEP	HCCA
BP	GO:0006355	regulation of DNA-templated transcription	IEP	HCCA
BP	GO:0009889	regulation of biosynthetic process	IEP	HCCA
BP	GO:0010468	regulation of gene expression	IEP	HCCA
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	HCCA
MF	GO:0015267	channel activity	IEP	HCCA
MF	GO:0015276	ligand-gated monoatomic ion channel activity	IEP	HCCA
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0019222	regulation of metabolic process	IEP	HCCA
MF	GO:0022803	passive transmembrane transporter activity	IEP	HCCA
MF	GO:0022834	ligand-gated channel activity	IEP	HCCA
MF	GO:0022836	gated channel activity	IEP	HCCA
MF	GO:0022839	monoatomic ion gated channel activity	IEP	HCCA
MF	GO:0022857	transmembrane transporter activity	IEP	HCCA
BP	GO:0031323	regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	HCCA
MF	GO:0043565	sequence-specific DNA binding	IEP	HCCA
BP	GO:0050789	regulation of biological process	IEP	HCCA
BP	GO:0050794	regulation of cellular process	IEP	HCCA
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051252	regulation of RNA metabolic process	IEP	HCCA
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0065007	biological regulation	IEP	HCCA
BP	GO:0080090	regulation of primary metabolic process	IEP	HCCA
MF	GO:0140110	transcription regulator activity	IEP	HCCA
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	HCCA
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	107	259

External Links

No external refs found!

Adi_g034248 (PDR4, ATPDR4)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation