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  5. Adi_g026180

Adi_g026180 (RAN2)


Aliases : RAN2

Description : GTPase *(Ran) & original description: none


Gene families : OG0000916 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000916_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g026180

Target Alias Description ECC score Gene Family Method Actions
AT5G20010 RAN1, RAN-1, ATRAN1 RAS-related nuclear protein-1 0.02 OrthoFinder output from all 47 species
AT5G55190 RAN3, ATRAN3 RAN GTPase 3 0.02 OrthoFinder output from all 47 species
Aop_g51668 RAN3, ATRAN3 GTPase *(Ran) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0147.g053043 RAN2 GTPase *(Ran) & original description: CDS=1-873 0.04 OrthoFinder output from all 47 species
Azfi_s0548.g076431 RAN2 GTPase *(Ran) & original description: CDS=1-873 0.04 OrthoFinder output from all 47 species
Cba_g45894 RAN2 GTPase *(Ran) & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01035804001 RAN2 Protein translocation.nucleus.nucleocytoplasmic... 0.02 OrthoFinder output from all 47 species
Len_g18796 RAN2 GTPase *(Ran) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g56304 RAN2 GTPase *(Ran) & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c20_18280V3.1 RAN2, Pp3c20_18280 RAN GTPase 3 0.01 OrthoFinder output from all 47 species
Ppi_g06209 RAN3, ATRAN3 GTPase *(Ran) & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR001806 Small_GTPase 14 170
No external refs found!