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  5. Adi_g017907

Adi_g017907


Description : not classified & original description: none


Gene families : OG0004023 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004023_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g017907

Target Alias Description ECC score Gene Family Method Actions
Als_g10416 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05987 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g15637 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene70102.t1 Aspi01Gene70102 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g25946 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.12G037000.1 Ceric.12G037000 not classified & original description: pacid=50600637... 0.05 OrthoFinder output from all 47 species
Ceric.1Z219100.1 Ceric.1Z219100 not classified & original description: pacid=50617071... 0.04 OrthoFinder output from all 47 species
Ceric.23G078700.1 Ceric.23G078700 not classified & original description: pacid=50610433... 0.03 OrthoFinder output from all 47 species
Dcu_g23419 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g38642 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp8g03500.1 No alias Pentatricopeptide repeat-containing protein At1g05670,... 0.02 OrthoFinder output from all 47 species
Nbi_g08780 CRM3, HCF152 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g01185 CRM3, HCF152 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006174 No alias not classified & original description: CDS=16-1263 0.02 OrthoFinder output from all 47 species
Sam_g37245 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo441948 No alias Pentatricopeptide repeat-containing protein At2g31400,... 0.02 OrthoFinder output from all 47 species
Spa_g15086 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004177 aminopeptidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 322 342
IPR002885 Pentatricopeptide_repeat 428 455
IPR002885 Pentatricopeptide_repeat 166 210
IPR002885 Pentatricopeptide_repeat 357 403
No external refs found!