Adi_g017444 (ABO1, ELO2)

Aliases : ABO1, ELO2

Description : component *(ELP1) of ELONGATOR transcription elongation complex & original description: none

Gene families : OG0006371 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006371_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Adi_g017444

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00012p00082490	ABO1, ELO2,...	RNA biosynthesis.RNA polymerase II-dependent...	0.02	OrthoFinder output from all 47 species
Aev_g35033	ABO1, ELO2	component *(ELP1) of ELONGATOR transcription elongation...	0.02	OrthoFinder output from all 47 species
Aop_g11869	ABO1, ELO2	component *(ELP1) of ELONGATOR transcription elongation...	0.02	OrthoFinder output from all 47 species
Aspi01Gene65633.t1	ABO1, ELO2,...	component *(ELP1) of ELONGATOR transcription elongation...	0.03	OrthoFinder output from all 47 species
Ceric.14G027500.1	ABO1, ELO2,...	component *(ELP1) of ELONGATOR transcription elongation...	0.03	OrthoFinder output from all 47 species
Lfl_g09984	ABO1, ELO2	component *(ELP1) of ELONGATOR transcription elongation...	0.04	OrthoFinder output from all 47 species
Ore_g19682	ABO1, ELO2	component *(ELP1) of ELONGATOR transcription elongation...	0.03	OrthoFinder output from all 47 species
Tin_g08435	ABO1, ELO2	component *(ELP1) of ELONGATOR transcription elongation...	0.01	OrthoFinder output from all 47 species
Zm00001e008063_P001	ABO1, ELO2,...	component ELP1 of ELONGATOR transcription elongation complex	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0002097	tRNA wobble base modification	None	Extended
BP	GO:0002098	tRNA wobble uridine modification	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006399	tRNA metabolic process	None	Extended
BP	GO:0006400	tRNA modification	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008033	tRNA processing	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009451	RNA modification	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0033588	elongator holoenzyme complex	IEA	Interproscan
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
CC	GO:0140535	intracellular protein-containing complex	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	IEP	HCCA
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0003743	translation initiation factor activity	IEP	HCCA
MF	GO:0003968	RNA-dependent RNA polymerase activity	IEP	HCCA
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	HCCA
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
BP	GO:0005984	disaccharide metabolic process	IEP	HCCA
BP	GO:0005991	trehalose metabolic process	IEP	HCCA
BP	GO:0005992	trehalose biosynthetic process	IEP	HCCA
BP	GO:0006281	DNA repair	IEP	HCCA
BP	GO:0006302	double-strand break repair	IEP	HCCA
BP	GO:0006303	double-strand break repair via nonhomologous end joining	IEP	HCCA
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	HCCA
BP	GO:0006886	intracellular protein transport	IEP	HCCA
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	HCCA
BP	GO:0009311	oligosaccharide metabolic process	IEP	HCCA
BP	GO:0009312	oligosaccharide biosynthetic process	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
BP	GO:0016567	protein ubiquitination	IEP	HCCA
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	HCCA
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	HCCA
CC	GO:0030117	membrane coat	IEP	HCCA
CC	GO:0030120	vesicle coat	IEP	HCCA
CC	GO:0030126	COPI vesicle coat	IEP	HCCA
BP	GO:0032446	protein modification by small protein conjugation	IEP	HCCA
BP	GO:0033554	cellular response to stress	IEP	HCCA
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	HCCA
BP	GO:0034637	cellular carbohydrate biosynthetic process	IEP	HCCA
BP	GO:0043038	amino acid activation	IEP	HCCA
BP	GO:0043039	tRNA aminoacylation	IEP	HCCA
BP	GO:0046351	disaccharide biosynthetic process	IEP	HCCA
BP	GO:0051716	cellular response to stimulus	IEP	HCCA
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:0097747	RNA polymerase activity	IEP	HCCA
MF	GO:0140098	catalytic activity, acting on RNA	IEP	HCCA
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	HCCA
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006849	Elp1	1	960

External Links

No external refs found!

Adi_g017444 (ABO1, ELO2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation