MA_10432378g0010


Description : component Symplekin/Pta1 of Cleavage and Polyadenylation Specificity Factor (CPSF) complex


Gene families : OG_01_0001799 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001799_tree ,
OG_02_0013996 (LandPlants) Phylogenetic Tree(s): OG_02_0013996_tree ,
OG_03_0013913 (SeedPlants) Phylogenetic Tree(s): OG_03_0013913_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10432378g0010
Cluster HCCA: Cluster_520

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00088050 evm_27.TU.AmTr_v1... RNA processing.RNA 3-end polyadenylation.Cleavage and... 0.08 Archaeplastida
AT1G27595 No alias CONTAINS InterPro DOMAIN/s: Symplekin tight junction... 0.09 Archaeplastida
AT5G01400 ESP4 HEAT repeat-containing protein 0.16 Archaeplastida
GSVIVT01009244001 No alias RNA processing.RNA 3-end polyadenylation.Cleavage and... 0.07 Archaeplastida
GSVIVT01011157001 No alias RNA processing.RNA 3-end polyadenylation.Cleavage and... 0.08 Archaeplastida
Gb_23976 No alias component Symplekin/Pta1 of Cleavage and Polyadenylation... 0.07 Archaeplastida
Gb_24672 No alias component Symplekin/Pta1 of Cleavage and Polyadenylation... 0.1 Archaeplastida
LOC_Os01g49940.1 No alias component Symplekin/Pta1 of Cleavage and Polyadenylation... 0.12 Archaeplastida
LOC_Os07g49320.1 No alias component Symplekin/Pta1 of Cleavage and Polyadenylation... 0.03 Archaeplastida
MA_10430259g0010 No alias component Symplekin/Pta1 of Cleavage and Polyadenylation... 0.04 Archaeplastida
Mp6g03410.1 No alias component Symplekin/Pta1 of Cleavage and Polyadenylation... 0.04 Archaeplastida
Pp3c2_10640V3.1 No alias HEAT repeat-containing protein 0.06 Archaeplastida
Smo442688 No alias RNA processing.RNA 3-end polyadenylation.Cleavage and... 0.04 Archaeplastida
Solyc04g076900.2.1 No alias component Symplekin/Pta1 of Cleavage and Polyadenylation... 0.05 Archaeplastida
Solyc04g076910.3.1 No alias component Symplekin/Pta1 of Cleavage and Polyadenylation... 0.1 Archaeplastida
Solyc09g005330.3.1 No alias component Symplekin/Pta1 of Cleavage and Polyadenylation... 0.1 Archaeplastida
Solyc09g005340.3.1 No alias component Symplekin/Pta1 of Cleavage and Polyadenylation... 0.04 Archaeplastida
Zm00001e020082_P004 No alias component Symplekin/Pta1 of Cleavage and Polyadenylation... 0.16 Archaeplastida
Zm00001e035946_P001 No alias component Symplekin/Pta1 of Cleavage and Polyadenylation... 0.08 Archaeplastida
Solyc04g076900.2.1 No alias component Symplekin/Pta1 of Cleavage and Polyadenylation... 0.02 LandPlants
Solyc04g076900.2.1 No alias component Symplekin/Pta1 of Cleavage and Polyadenylation... 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR032460 Symplekin/Pta1_N 97 248
No external refs found!