Ehy_g09038 (ATPRFB, HCF109)

Aliases : ATPRFB, HCF109

Description : translation peptide chain release factor *(PrfB) & original description: none

Gene families : OG0002101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002101_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ehy_g09038
Cluster	HCCA: Cluster_3

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00066p00184560	ATPRFB, HCF109,...	Protein biosynthesis.organelle translation...	0.03	OrthoFinder output from all 47 species
Adi_g040965	ATPRFB, HCF109	translation peptide chain release factor *(PrfB) &...	0.02	OrthoFinder output from all 47 species
Aev_g07867	No alias	translation peptide chain release factor *(PrfB) &...	0.03	OrthoFinder output from all 47 species
Aop_g21412	ATPRFB, HCF109	translation peptide chain release factor *(PrfB) &...	0.03	OrthoFinder output from all 47 species
Azfi_s0252.g060375	ATPRFB, HCF109	translation peptide chain release factor *(PrfB) &...	0.03	OrthoFinder output from all 47 species
Cba_g23243	ATPRFB, HCF109	translation peptide chain release factor *(PrfB) &...	0.02	OrthoFinder output from all 47 species
Ceric.36G013000.1	ATPRFB, HCF109,...	translation peptide chain release factor *(PrfB) &...	0.03	OrthoFinder output from all 47 species
Cre01.g010864	ATPRFB, HCF109	Protein biosynthesis.organelle translation...	0.01	OrthoFinder output from all 47 species
GSVIVT01033556001	No alias	Protein biosynthesis.organelle translation...	0.04	OrthoFinder output from all 47 species
Gb_09148	No alias	PrfB-type translation peptide chain release factor	0.05	OrthoFinder output from all 47 species
Gb_27626	ATPRFB, HCF109	PrfB-type translation peptide chain release factor	0.02	OrthoFinder output from all 47 species
Msp_g44375	ATPRFB, HCF109	translation peptide chain release factor *(PrfB) &...	0.04	OrthoFinder output from all 47 species
Nbi_g12251	ATPRFB, HCF109	translation peptide chain release factor *(PrfB) &...	0.03	OrthoFinder output from all 47 species
Ore_g03628	ATPRFB, HCF109	translation peptide chain release factor *(PrfB) &...	0.02	OrthoFinder output from all 47 species
Ore_g15749	ATPRFB, HCF109	translation peptide chain release factor *(PrfB) &...	0.02	OrthoFinder output from all 47 species
Pir_g63203	ATPRFB, HCF109	translation peptide chain release factor *(PrfB) &...	0.03	OrthoFinder output from all 47 species
Smo75160	No alias	Protein biosynthesis.organelle translation...	0.02	OrthoFinder output from all 47 species
Solyc01g100420.3.1	Solyc01g100420	PrfB-type translation peptide chain release factor	0.02	OrthoFinder output from all 47 species
Solyc04g025290.4.1	ATPRFB, HCF109,...	PrfB-type translation peptide chain release factor	0.04	OrthoFinder output from all 47 species
Solyc10g079840.2.1	Solyc10g079840	PrfB-type translation peptide chain release factor	0.02	OrthoFinder output from all 47 species
Spa_g09555	ATPRFB, HCF109	translation peptide chain release factor *(PrfB) &...	0.04	OrthoFinder output from all 47 species
Tin_g15298	ATPRFB, HCF109	translation peptide chain release factor *(PrfB) &...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003747	translation release factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006415	translational termination	IEA	Interproscan
MF	GO:0008079	translation termination factor activity	None	Extended
MF	GO:0008135	translation factor activity, RNA binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0022411	cellular component disassembly	None	Extended
BP	GO:0032984	protein-containing complex disassembly	None	Extended
BP	GO:0043933	protein-containing complex organization	None	Extended
MF	GO:0045182	translation regulator activity	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0090079	translation regulator activity, nucleic acid binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	HCCA
BP	GO:0006399	tRNA metabolic process	IEP	HCCA
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	HCCA
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	IEP	HCCA
MF	GO:0016811	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	IEP	HCCA
MF	GO:0016872	intramolecular lyase activity	IEP	HCCA
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	HCCA
MF	GO:0042586	peptide deformylase activity	IEP	HCCA
BP	GO:0043038	amino acid activation	IEP	HCCA
BP	GO:0043039	tRNA aminoacylation	IEP	HCCA
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005139	PCRF	126	314
IPR000352	Pep_chain_release_fac_I	326	433

External Links

No external refs found!

Ehy_g09038 (ATPRFB, HCF109)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation