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  5. Adi_g012143

Adi_g012143


Description : plastidial RNA splicing factor *(HPE1) & original description: none


Gene families : OG0007581 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007581_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g012143

Target Alias Description ECC score Gene Family Method Actions
Dde_g26366 No alias plastidial RNA splicing factor *(HPE1) & original... 0.05 OrthoFinder output from all 47 species
Len_g14318 No alias plastidial RNA splicing factor *(HPE1) & original... 0.04 OrthoFinder output from all 47 species
Ore_g06305 No alias plastidial RNA splicing factor *(HPE1) & original... 0.02 OrthoFinder output from all 47 species
Pir_g16008 No alias plastidial RNA splicing factor *(HPE1) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0062.g015456 No alias plastidial RNA splicing factor *(HPE1) & original... 0.02 OrthoFinder output from all 47 species
Sam_g40721 No alias plastidial RNA splicing factor *(HPE1) & original... 0.02 OrthoFinder output from all 47 species
Smo442087 No alias RNA processing.organelle machineries.RNA... 0.02 OrthoFinder output from all 47 species
Spa_g30782 No alias plastidial RNA splicing factor *(HPE1) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e013842_P001 Zm00001e013842 HPE1 plastidial RNA splicing factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004363 glutathione synthase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006749 glutathione metabolic process IEP HCCA
BP GO:0006750 glutathione biosynthetic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019184 nonribosomal peptide biosynthetic process IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
BP GO:0042398 cellular modified amino acid biosynthetic process IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
MF GO:0042803 protein homodimerization activity IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0060590 ATPase regulator activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
BP GO:0140673 transcription elongation-coupled chromatin remodeling IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
MF GO:1904091 non-ribosomal peptide synthetase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!