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  5. Sacu_v1.1_s0177.g024651

Sacu_v1.1_s0177.g024651


Description : not classified & original description: CDS=866-1933


Gene families : OG0008527 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008527_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0177.g024651
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
Ala_g13189 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g04101 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g21477 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Mp1g22640.1 No alias Fruit protein pKIWI502 OS=Actinidia deliciosa... 0.05 OrthoFinder output from all 47 species
Ore_g17876 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13280 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004371 glycerone kinase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006071 glycerol metabolic process IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019400 alditol metabolic process IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
BP GO:0110102 ribulose bisphosphate carboxylase complex assembly IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!