Sacu_v1.1_s0146.g023066 (AtWRKY20, WRKY20)

Aliases : AtWRKY20, WRKY20

Description : WRKY-type transcription factor & original description: CDS=31-1677

Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sacu_v1.1_s0146.g023066

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00003p00229970	WRKY48,...	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
AMTR_s00058p00090300	WRKY4,...	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
AMTR_s00065p00201230	ATWRKY40,...	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
AMTR_s00088p00164440	AtWRKY20,...	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
AT1G62300	WRKY6, ATWRKY6	WRKY family transcription factor	0.03	OrthoFinder output from all 47 species
AT2G40750	WRKY54, ATWRKY54	WRKY DNA-binding protein 54	0.03	OrthoFinder output from all 47 species
AT5G49520	WRKY48, ATWRKY48	WRKY DNA-binding protein 48	0.03	OrthoFinder output from all 47 species
Adi_g039781	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g061046	WRKY9, ATWRKY9	WRKY-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Aev_g47915	WRKY43, ATWRKY43	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g49345	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Als_g35701	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g09048	WRKY4	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g11911	WRKY42, AtWRKY42	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0065.g035812	WRKY9, ATWRKY9	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Azfi_s0245.g059987	AtWRKY20, WRKY20	WRKY-type transcription factor & original description: CDS=1-2319	0.05	OrthoFinder output from all 47 species
Cba_g25504	WRKY28, ATWRKY28	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g30094	No alias	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.24G019100.1	Ceric.24G019100	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.28G003100.1	WRKY31,...	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Dac_g27869	WRKY42, AtWRKY42	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g19327	ATWRKY57, WRKY57	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g21871	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g26904	WRKY28, ATWRKY28	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g27429	WRKY72, ATWRKY72	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g29785	WRKY56, ATWRKY56	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01030046001	AtWRKY20, WRKY20	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
Gb_01873	ATWRKY71, WRKY71	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Gb_23334	WRKY31, ATWRKY31	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os01g14440.1	WRKY6, ATWRKY6,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os01g43650.1	WRKY28,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
LOC_Os12g32250.1	WRKY3, LOC_Os12g32250	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
MA_120697g0010	ATWRKY71, WRKY71	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Mp8g10640.1	WRKY4	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Msp_g08798	WRKY31, ATWRKY31	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g17722	WRKY4	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g22081	No alias	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g23997	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g26781	No alias	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Solyc02g094270.2.1	WRKY75,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Solyc03g095770.3.1	ATWRKY70,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Solyc05g012770.3.1	WRKY4, Solyc05g012770	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Spa_g26702	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g30009	AtWRKY20, WRKY20	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e038062_P002	WRKY4, Zm00001e038062	transcription factor (WRKY)	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
CC	GO:0000159	protein phosphatase type 2A complex	IEP	HCCA
MF	GO:0000166	nucleotide binding	IEP	HCCA
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0003993	acid phosphatase activity	IEP	HCCA
MF	GO:0004664	prephenate dehydratase activity	IEP	HCCA
MF	GO:0004672	protein kinase activity	IEP	HCCA
MF	GO:0004721	phosphoprotein phosphatase activity	IEP	HCCA
MF	GO:0005509	calcium ion binding	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
BP	GO:0006099	tricarboxylic acid cycle	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006558	L-phenylalanine metabolic process	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
MF	GO:0008138	protein tyrosine/serine/threonine phosphatase activity	IEP	HCCA
CC	GO:0008287	protein serine/threonine phosphatase complex	IEP	HCCA
MF	GO:0008483	transaminase activity	IEP	HCCA
BP	GO:0009072	aromatic amino acid metabolic process	IEP	HCCA
BP	GO:0009073	aromatic amino acid family biosynthetic process	IEP	HCCA
BP	GO:0009094	L-phenylalanine biosynthetic process	IEP	HCCA
BP	GO:0009095	aromatic amino acid family biosynthetic process, prephenate pathway	IEP	HCCA
MF	GO:0010181	FMN binding	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
BP	GO:0016311	dephosphorylation	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016769	transferase activity, transferring nitrogenous groups	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	HCCA
MF	GO:0016791	phosphatase activity	IEP	HCCA
MF	GO:0016835	carbon-oxygen lyase activity	IEP	HCCA
MF	GO:0016836	hydro-lyase activity	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
MF	GO:0019208	phosphatase regulator activity	IEP	HCCA
MF	GO:0019888	protein phosphatase regulator activity	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
MF	GO:0044183	protein folding chaperone	IEP	HCCA
MF	GO:0046912	acyltransferase activity, acyl groups converted into alkyl on transfer	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
MF	GO:0140662	ATP-dependent protein folding chaperone	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA
BP	GO:1901607	alpha-amino acid biosynthetic process	IEP	HCCA
BP	GO:1902221	erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process	IEP	HCCA
BP	GO:1902223	erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process	IEP	HCCA
CC	GO:1903293	phosphatase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	237	292
IPR003657	WRKY_dom	420	476

External Links

No external refs found!

Sacu_v1.1_s0146.g023066 (AtWRKY20, WRKY20)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation