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  5. Sacu_v1.1_s0146.g023058

Sacu_v1.1_s0146.g023058 (CRR6)


Aliases : CRR6

Description : assembly factor CRR6 involved in NDH complex assembly & original description: CDS=77-967


Gene families : OG0005729 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005729_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0146.g023058
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
Als_g15025 CRR6 assembly factor CRR6 involved in NDH complex assembly &... 0.04 OrthoFinder output from all 47 species
Als_g18011 CRR6 assembly factor CRR6 involved in NDH complex assembly &... 0.03 OrthoFinder output from all 47 species
Aop_g09384 CRR6 assembly factor CRR6 involved in NDH complex assembly &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene26399.t1 CRR6, Aspi01Gene26399 assembly factor CRR6 involved in NDH complex assembly &... 0.04 OrthoFinder output from all 47 species
Azfi_s0111.g045636 CRR6 assembly factor CRR6 involved in NDH complex assembly &... 0.03 OrthoFinder output from all 47 species
Ceric.03G046600.1 CRR6, Ceric.03G046600 assembly factor CRR6 involved in NDH complex assembly &... 0.03 OrthoFinder output from all 47 species
Ceric.08G039900.1 CRR6, Ceric.08G039900 assembly factor CRR6 involved in NDH complex assembly &... 0.05 OrthoFinder output from all 47 species
Dde_g19322 CRR6 assembly factor CRR6 involved in NDH complex assembly &... 0.04 OrthoFinder output from all 47 species
GSVIVT01012872001 CRR6 Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.04 OrthoFinder output from all 47 species
LOC_Os08g07060.1 CRR6, LOC_Os08g07060 assembly factor CRR6 involved in NDH complex assembly 0.04 OrthoFinder output from all 47 species
Len_g27896 CRR6 assembly factor CRR6 involved in NDH complex assembly &... 0.03 OrthoFinder output from all 47 species
Lfl_g26236 CRR6 assembly factor CRR6 involved in NDH complex assembly &... 0.04 OrthoFinder output from all 47 species
Mp5g09020.1 CRR6 assembly factor CRR6 involved in NDH complex assembly 0.03 OrthoFinder output from all 47 species
Sam_g06198 No alias assembly factor CRR6 involved in NDH complex assembly &... 0.03 OrthoFinder output from all 47 species
Solyc07g007280.4.1 CRR6, Solyc07g007280 assembly factor CRR6 involved in NDH complex assembly 0.03 OrthoFinder output from all 47 species
Spa_g05242 CRR6 assembly factor CRR6 involved in NDH complex assembly &... 0.02 OrthoFinder output from all 47 species
Zm00001e021681_P001 CRR6, Zm00001e021681 assembly factor CRR6 involved in NDH complex assembly 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR014946 CRR6 85 188
IPR014946 CRR6 233 291
No external refs found!