Description : component *(LUX) of circadian clock Evening complex (EC) & original description: CDS=1-783
Gene families : OG0000124 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000124_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Adi_g054623 | ARR1, RR1 | subgroup ARR-B transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene00999.t1 | RR2, ARR2,... | subgroup ARR-B transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Cba_g13893 | ARR11 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Cba_g16660 | ARR1, RR1 | subgroup ARR-B transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ceric.21G058200.1 | RR12, ARR12,... | subgroup ARR-B transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
Cre05.g243000 | ARR1, RR1 | RNA biosynthesis.transcriptional activation.ARR-B... | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g02838 | LUX, PCL1 | component *(LUX) of circadian clock Evening complex (EC)... | 0.01 | OrthoFinder output from all 47 species | |
Pnu_g12888 | LUX, PCL1 | component *(LUX) of circadian clock Evening complex (EC)... | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g02352 | ARR1, RR1 | subgroup ARR-B transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | IEP | HCCA |
BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | HCCA |
MF | GO:0003724 | RNA helicase activity | IEP | HCCA |
MF | GO:0004386 | helicase activity | IEP | HCCA |
MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | HCCA |
BP | GO:0005975 | carbohydrate metabolic process | IEP | HCCA |
BP | GO:0006401 | RNA catabolic process | IEP | HCCA |
BP | GO:0006402 | mRNA catabolic process | IEP | HCCA |
MF | GO:0008186 | ATP-dependent activity, acting on RNA | IEP | HCCA |
BP | GO:0009892 | negative regulation of metabolic process | IEP | HCCA |
BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0010629 | negative regulation of gene expression | IEP | HCCA |
BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
MF | GO:0016787 | hydrolase activity | IEP | HCCA |
MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | HCCA |
BP | GO:0019439 | aromatic compound catabolic process | IEP | HCCA |
BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | HCCA |
BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | HCCA |
BP | GO:0046700 | heterocycle catabolic process | IEP | HCCA |
BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
BP | GO:1901361 | organic cyclic compound catabolic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001005 | SANT/Myb | 147 | 195 |
No external refs found! |